Bioconductor DistanceToNearest

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896

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rtracklayer ranges distanceToNearest

10 months ago robjohn70000 • 0

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931

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GenomicRanges GenomicFeatures grange distanceToNearest R

5.0 years ago rmash ▴ 20

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1.3k

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GenomicRanges distancetonearest strandedness

updated 6.6 years ago by Valerie Obenchain ★ 6.8k • written 6.6 years ago by shraddha.pai • 0

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GRanges distancetonearest

updated 7.0 years ago by Julie Zhu ★ 4.3k • written 7.0 years ago by chitsazanalex ▴ 10

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4.9k

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chipenrich granges distancetonearest function dataframe

7.0 years ago rbronste ▴ 60

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2.2k

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genomicranges DistanceToNearest

updated 8.2 years ago by Valerie Obenchain ★ 6.8k • written 8.2 years ago by roladali ▴ 20

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Answer: Deseq2 res Function by Michael Love 43k

> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…

Answer: ANOVA like approach of edgeR by Gordon Smyth 51k

You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…

Answer: Create Illmina bead summary data by Gordon Smyth 51k

GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

OK thank you.

Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k

You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.

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Answer: Deseq2 res Function

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification

Answer: ANOVA like approach of edgeR

Comment: ANOVA like approach of edgeR

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