Bioconductor Co-expression

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biologicalnetworkanalysis genomes RNA-Seq co-expression wgcna

7 months ago Fernanda • 0

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network co-expression WGCNA

updated 2.6 years ago by andres.firrincieli ▴ 50 • written 2.6 years ago by ikumar2000 ▴ 10

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wgcna co-expression

updated 5.8 years ago by mikhael.manurung ▴ 280 • written 5.8 years ago by Lin ▴ 50

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1.3k

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wgcna network co-expression rnaseq

updated 6.0 years ago by Peter Langfelder ★ 3.0k • written 6.0 years ago by Arindam ▴ 80

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WGCNA R network co-expression

updated 2.3 years ago by Peter Langfelder ★ 3.0k • written 6.0 years ago by avelarbio46 ▴ 10

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Comment: Unable to install a forged BSgenome package by James W. MacDonald 68k

R doesn't like the name of your package. I would bet that it's the minus sign, so maybe remove that from the name of the package and from t…

Comment: Unable to install a forged BSgenome package by JABEZ RAJU • 0

install.packages("E:/PhD data/RNAseq/TSS/BSgenome.Hnudivirus-2.NCBI.ViralProj14215", repos = NULL, type = "source") Installing package into…

Comment: DESeq2 with proteomics data by wook2014 • 0

You may need to do NA imputation before give the data to DEseq2 and there are study on DEseq2 performance on proteomics data, like :https:/…

Answer: Unable to install a forged BSgenome package by James W. MacDonald 68k

Add a repos = NULL to `install.packages`. You may also need to either move the file to a dir that doesn't have a space in the name or you […

Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an by James W. MacDonald 68k

Have you figured out how to do this using tidy grammar? Using non-tidy grammar is quite simple, and perhaps you already know how to do that…

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Answer: Unable to install a forged BSgenome package

Answer: How to combine two DESeq2 objects (dds) for analysis

How to combine two DESeq2 objects (dds) for analysis

How can I correctly use phyloseq with Docker?

A: DESeq2::sizeFactors() function does not output the sizeFactor table.

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Popular Question to caroline.zanchi • 0