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chromosome
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0
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2
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629
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How to find the number of protein-coding genes in each chromosome arm in human?
gene
chromosome
proteincodinggene
14 months ago
Liliian
• 0
3
votes
5
replies
2.0k
views
Splitting a TxDB or GRanges by Chromosome
GenomicRanges
split
chromosome
TxDb
updated 2.6 years ago by
Hervé Pagès
16k • written 2.6 years ago by
jon.klonowski
▴ 40
5
votes
4
replies
10k
views
Getting rs ids using chr coordinates | Biomart
SNP
rs id
Biomart
Chromosome
coordinates
updated 11 months ago by
James W. MacDonald
66k • written 3.9 years ago by
Mahan
• 0
0
votes
4
replies
814
views
Genomic Annotation Package Ensembl
Chromosome
Annotation
updated 3.9 years ago by
James W. MacDonald
66k • written 3.9 years ago by
Bine
▴ 50
0
votes
2
replies
828
views
Parsing error creating tx2gene object for tximport
tximport
GCF feature table
parsing error
chromosome
updated 4.2 years ago by
Michael Love
42k • written 4.2 years ago by
knholm
• 0
0
votes
0
replies
549
views
Conversion of RefSeq data to chromosomal position
RefSeq
Chromosome
Mutalyzer
4.2 years ago
heiko_kin
▴ 60
1
vote
1
reply
519
views
Differential Expression by Chromosome using edgeR
edgeR
chromosome
RNAseq
updated 4.3 years ago by
swbarnes2
★ 1.4k • written 4.3 years ago by
missmoparker
• 0
0
votes
1
reply
819
views
Understand the chromosome name in homo sapiens gene database
homo sapiens
chromosome
updated 6.1 years ago by
James W. MacDonald
66k • written 6.1 years ago by
xchen8
• 0
2
votes
3
replies
2.0k
views
What's the best way to retrieve the sizes (lengths) of chromosomes for a reference genome assembly?
bsgenome
chromosome
reference genome
updated 6.3 years ago by
Hervé Pagès
16k • written 6.4 years ago by
Nathan Sheffield
▴ 10
1
vote
5
replies
2.6k
views
how to plot human genome chromosome Ideogram with each length by Gviz
Gviz
chromosome
ideogram
updated 7.3 years ago by
bernatgel
▴ 150 • written 7.4 years ago by
dulunar
▴ 10
10 results • Page
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Comment: limma comparison for small sample size and how to get covariance matrix
by
Gordon Smyth
51k
Your MDS plot is better than before, but you are still not following the recommendation for making for making such plots given in the limma…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Also, ``` > result <- mapUniProt( from = "EMBL-GenBank-DDBJ_CDS", to = "UniProtKB", query = c("ACF95883.1") ) > result From…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Ugh, here's the link https://www.uniprot.org/id-mapping/uniprotkb/dd08aa16774d98ef087dc3bd708582012bba49e2/overview?fields=accession%2Cre…
Answer: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
The input should be 'EMBL-GenBank-DDBJ_CDS", as that is a GenBank ID.
Answer: XCMS2 of orbitrap data
by
Elodie
• 0
Hi, I have the same question, I have acquired MS2 data with PRM analysis and inclusion lists of several ions. I have a list of product ion…
Votes
Answer: EPIC array hg38 annotation?
Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
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