written 17.4 years ago by
Igor Wojciechowski
▴
10
0
votes
1
reply
973
views
1
vote
2
replies
2.6k
views
12.4 years ago • updated 7.2 years ago
Gordon Smyth
52k
2
votes
3
replies
1.4k
views
updated 7.2 years ago by
Gordon Smyth
52k
•
written 12.4 years ago by
Assa Yeroslaviz
★
1.5k
0
votes
0
replies
883
views
7.6 years ago
kitcurtius
•
0
5
votes
3
replies
1.8k
views
updated 7.7 years ago by
Marcel Ramos
700
•
written 8.4 years ago by
Sean Davis
21k
0
votes
0
replies
966
views
0
votes
1
reply
1.6k
views
updated 10.4 years ago by
Sean Davis
21k
•
written 10.4 years ago by
Guest User
★
13k
0
votes
0
replies
874
views
11.2 years ago
Isha Pandey Phd Scholar BITS Pilani Cam…
▴
10
0
votes
0
replies
1.4k
views
11.3 years ago
Cian Murphy
▴
40
0
votes
0
replies
964
views
0
votes
1
reply
1.5k
views
0
votes
1
reply
1.5k
views
updated 13.3 years ago by
Vincent J. Carey, Jr.
6.7k
•
written 13.3 years ago by
Chris Fenton
▴
80
0
votes
3
replies
2.6k
views
0
votes
0
replies
1.6k
views
0
votes
0
replies
989
views
0
votes
1
reply
1.8k
views
0
votes
2
replies
1.4k
views
updated 14.2 years ago by
Steve Lianoglou
★
13k
•
written 14.2 years ago by
Noemi Andor
▴
100
0
votes
1
reply
1.5k
views
updated 14.3 years ago by
Sean Davis
21k
•
written 14.3 years ago by
BTIS Department
▴
10
0
votes
1
reply
1.4k
views
updated 14.5 years ago by
Sean Davis
21k
•
written 14.5 years ago by
Noemi Andor
▴
100
0
votes
0
replies
1.1k
views
14.7 years ago
Erik Dassi
▴
10
0
votes
2
replies
1.7k
views
updated 14.7 years ago by
Joern Toedling
▴
450
•
written 14.7 years ago by
Chris Fenton
▴
80
0
votes
7
replies
1.6k
views
updated 14.7 years ago by
Sean Davis
21k
•
written 14.7 years ago by
adam_pgsql
▴
70
0
votes
1
reply
1.7k
views
0
votes
2
replies
1.5k
views
updated 15.0 years ago by
Sean Davis
21k
•
written 15.0 years ago by
adam_pgsql
▴
70
0
votes
0
replies
1.4k
views
15.2 years ago
Patrick Aboyoun
★
1.6k
0
votes
0
replies
1.2k
views
15.3 years ago
Dick Beyer
★
1.4k
0
votes
1
reply
1.0k
views
15.3 years ago
Giulio Di Giovanni
▴
540
0
votes
0
replies
1.2k
views
0
votes
1
reply
1.1k
views
0
votes
0
replies
885
views
15.7 years ago
Wolfgang Raffelsberger
▴
160
0
votes
1
reply
957
views
updated 15.7 years ago by
Oosting, J. PATH
▴
550
•
written 15.7 years ago by
Stacey Burrows
▴
30
0
votes
2
replies
1.3k
views
updated 15.8 years ago by
Sean Davis
21k
•
written 15.8 years ago by
Giulio Di Giovanni
▴
540
0
votes
1
reply
1.1k
views
updated 15.9 years ago by
Marc Carlson
★
7.2k
•
written 15.9 years ago by
Daren Tan
▴
190
0
votes
0
replies
1.1k
views
15.9 years ago
Daren Tan
▴
190
0
votes
1
reply
1.5k
views
0
votes
1
reply
851
views
updated 16.1 years ago by
Sean Davis
21k
•
written 16.1 years ago by
Mingkwan Nipitwattanaphon
▴
30
0
votes
5
replies
1.4k
views
0
votes
0
replies
1.8k
views
0
votes
1
reply
1.1k
views
updated 16.3 years ago by
Artur Veloso
▴
340
•
written 16.3 years ago by
Abhilash Venu
▴
340
0
votes
1
reply
1.2k
views
updated 16.3 years ago by
Sean Davis
21k
•
written 16.3 years ago by
Daniel Brewer
★
1.9k
0
votes
9
replies
2.0k
views
16.5 years ago
Oscar Rueda
▴
60
0
votes
0
replies
807
views
16.5 years ago
Henrique Proença
▴
80
0
votes
5
replies
1.4k
views
updated 16.5 years ago by
Sean Davis
21k
•
written 16.5 years ago by
Benjamin Otto
▴
830
0
votes
2
replies
1.2k
views
updated 16.7 years ago by
Alicia Oshlack
▴
70
•
written 16.7 years ago by
mb23
▴
30
0
votes
0
replies
948
views
0
votes
2
replies
1.1k
views
updated 16.7 years ago by
Sean Davis
21k
•
written 16.7 years ago by
mb23
▴
30
0
votes
0
replies
1.2k
views
0
votes
2
replies
1.0k
views
updated 16.8 years ago by
Abhilash Venu
▴
340
•
written 16.8 years ago by
Sean Davis
21k
0
votes
0
replies
738
views
0
votes
1
reply
1.2k
views
updated 16.8 years ago by
Sean Davis
21k
•
written 16.8 years ago by
João Fadista
▴
500
Recent ...
Replies
Comment: minfi latest update for EPIC V2 chip
by
macdonaldfrench7286566
•
0
Yes, the most updated analysis for the EPIC V2 chip using the minfi package still involves using the annotations provided by jokergoo.
*Th…
Answer: Incorporating Salmon offset matrix into Wilcoxon DEG analysis
by
Gordon Smyth
52k
To compute CPM values from edgeR:
```
y <- DGEList(counts = counts, samples = samples, genes = genes, group = samples$Disease_status)
y <- …
Comment: edgeR + tximport: calcNormFactors and the usage of offsets
by
Gordon Smyth
52k
Follow the vignette. It explains how to call edgeR's cpm function to use the offsets.
Comment: edgeR + tximport: calcNormFactors and the usage of offsets
by
Andre
•
0
But if i want to do another type of analysis like Wilcoxon/Mann-Whitney and want to incorporate salmon offset can i simply use the cpm func…
Comment: DESeq error: counts matrix should be numeric, currently it has mode: character
by
Kucsera
•
0
After applying your suggestion, the following error pops up:
```
Error in mde(x) : 'list' object cannot be coerced to type 'double'
```
Votes
Awards
• All
Popular Question to
shepherl
4.1k
Popular Question to
Gordon Smyth
52k
Popular Question to
rohitsatyam102
▴
20
Popular Question to
Hervé Pagès
16k
Locations
• All
UPF, Barcelona, Spain, 6 minutes ago
United Kingdom, 27 minutes ago
United States, 1 hour ago
United States, 2 hours ago
China, 2 hours ago
UPF, Barcelona, Spain, 6 minutes ago
United Kingdom, 27 minutes ago
United States, 1 hour ago
United States, 2 hours ago
China, 2 hours ago
Traffic: 387 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6