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Showing :
boxplot
•
reset
2
votes
6
replies
2.1k
views
How to make boxplot with pairwise and overall p value from Limma
t.test
boxplot
limma
anova
8 months ago
Chris
▴ 20
0
votes
1
reply
750
views
How to add pvalue to boxplot?
boxplot
ggplot2
updated 23 months ago by
ATpoint
★ 4.6k • written 23 months ago by
Sooni
▴ 10
0
votes
5
replies
1.0k
views
knitr error in sort.int - unable to knit a chunk with boxplot codes
knitr
boxplot
updated 5.0 years ago by
James W. MacDonald
67k • written 5.0 years ago by
poojitha.stemcell
▴ 10
0
votes
1
reply
1.2k
views
boxplot Error in Bioconductor
boxplot
bioconductor
R
error
5.0 years ago
l154359
• 0
2
votes
3
replies
1.8k
views
Boxplot function not showing all reads length on x-axis
boxplot
reads
fastq
sequencing
rsubread
updated 5.6 years ago by
Wei Shi
★ 3.6k • written 5.6 years ago by
Raito92
▴ 60
0
votes
0
replies
867
views
How to color samples in boxplot based on treatment or control using covdesc file
affy
boxplot
5.7 years ago
pratikshasharma47
• 0
1
vote
1
reply
819
views
Boxplot of merged data set ,colored according to control vs treatment
boxplot
affymetrix data
diferential expression
5.7 years ago
pratikshasharma47
• 0
2
votes
2
replies
821
views
Boxplot object (from the RNASeqGeneEdgeRQL workflow) returning a blank file...
boxplot
software error
updated 5.7 years ago by
Gordon Smyth
52k • written 5.7 years ago by
Raito92
▴ 60
7
votes
11
replies
5.5k
views
Comparing means of VST tranformed RNA-Seq counts in different groups of samples with boxplots
VST
deseq2
boxplot
rnaseq
updated 6.6 years ago by
Michael Love
43k • written 6.6 years ago by
Konstantinos Yeles
▴ 80
0
votes
2
replies
1.1k
views
understanding the meaning boxplot
boxplot
updated 7.8 years ago by
Peter Langfelder
★ 3.0k • written 7.8 years ago by
farahqureshi5
• 0
0
votes
4
replies
4.9k
views
error in sort.int , 'x' must be atomic in affy::boxplot
affy package
boxplot
hgu133plus2
oligo package
updated 7.8 years ago by
James W. MacDonald
67k • written 7.8 years ago by
Javier Pérez Florido
▴ 840
1
vote
4
replies
2.3k
views
EdgeR differentially expressed genes vs normal boxplot visualization
edgeR
boxplot
7.9 years ago
snowru
• 0
3
votes
10
replies
2.4k
views
Shifted dashed frame in Gviz boxplot
gviz
boxplot
updated 8.6 years ago by
florian.hahne@novartis.com
★ 1.6k • written 8.7 years ago by
enricoferrero
▴ 660
1
vote
8
replies
2.0k
views
boxplot, microarray, hugene 2.0 st
boxplot
microarray
pd.hugene.2.0.st
9.7 years ago
kanacska
▴ 10
0
votes
2
replies
1.3k
views
boxplot on an Rle object?
Rle
boxplot
9.9 years ago
Johannes Rainer
★ 2.1k
15 results • Page
1 of 1
Recent ...
Replies
Answer: DESeq error: counts matrix should be numeric, currently it has mode: character
by
ATpoint
★ 4.6k
R thinks your data are characters (e.g. "1", "2", instead of 1, 2) so given that your `counts_data` indeed only contains counts, do: `mo…
Comment: Any tools to convert .gff to .gtf format
by
ControlF5
• 0
Yes, the Appsierra team recently built a tool to convert .gff to .gtf format. [ControlF5][1] is providing the best software testing service…
Comment: EuroBioC2024 abstract submission is open!
by
Alan Downey
• 0
EuroBioC2024 has opened its abstract submission process, presenting an exciting opportunity for researchers to contribute to groundbreaking…
Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix
by
O'Brien
• 0
Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…
Answer: combining raw counts and estimated counts
by
O'Brien
• 0
It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…
Votes
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: RNA-seq Normalisation - normalise all samples in experiment or only the ones use
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
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