Bioconductor Biseq

Showing : biseq • reset

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865

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BiSeq

3.1 years ago thomas.koefoed • 0

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955

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Biseq Methylation DMP DMR RRBS

4.6 years ago i.s.castanho • 0

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1.2k

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bedgraph .cov wig biseq coverage

4.6 years ago akhaira • 0

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921

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BiSeq testClusters error dmr

4.7 years ago • updated 4.6 years ago akhaira • 0

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1.3k

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biseq beta regression

4.7 years ago akhaira • 0

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625

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Biseq

4.7 years ago akhaira • 0

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1.7k

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BiSeq DMR

updated 4.7 years ago by James W. MacDonald 68k • written 4.7 years ago by akhaira • 0

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787

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BiSeq Coldata

4.8 years ago akhaira • 0

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863

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biseq R methylation

4.8 years ago AishaD • 0

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811

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biseq betaRegression RRBS Methylation

4.9 years ago i.s.castanho • 0

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940

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BiSeq Wald test Beta regression

6.1 years ago mira • 0

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1.2k

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biseq package installation r

updated 6.1 years ago by Martin Morgan 25k • written 6.1 years ago by lwh863 • 0

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1.1k

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biseq ccle

6.6 years ago spr ▴ 10

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1.3k

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dna methylation biseq

updated 7.2 years ago by Gordon Smyth 52k • written 7.2 years ago by ahmad.moousavi • 0

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1.3k

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biseq RRBS betaregression

7.9 years ago l.eijssen • 0

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1.5k

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biseq methylation dmr analysis

updated 8.2 years ago by Katja Hebestreit ▴ 130 • written 8.2 years ago by jjalmagro • 0

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2.2k

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biseq error trimClusters

updated 9.1 years ago by Katja Hebestreit ▴ 130 • written 9.1 years ago by kms68 • 0

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1.9k

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methylation linear model dmr bsseq biseq

9.2 years ago enricoferrero ▴ 680

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2.1k

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BiSeq readBismark

updated 9.3 years ago by James W. MacDonald 68k • written 9.3 years ago by Neel Aluru ▴ 460

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2.9k

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dmr methylation deseq2 bsseq biseq

updated 9.4 years ago by Kasper Daniel Hansen ★ 6.5k • written 9.4 years ago by enricoferrero ▴ 680

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3.6k

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biseq fdr data results

9.9 years ago • updated 9.8 years ago mnaymik ▴ 10

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2.4k

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biseq RRBS SAAP-BS coverage

9.8 years ago maria.maqueda • 0

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2.0k

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BiSeq BiSeq

updated 11.1 years ago by David Iles ▴ 130 • written 11.1 years ago by Hans-Ulrich Klein ▴ 330

23 results • Page 1 of 1

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Comment: Problem using locateVariants() from the VariantAnnotation package by Marco • 0

Ok, I think I found the problem. By looking at the `locateVariants()` source code, I was able to pinpoint that the problems is when trying …

Comment: Conumee for EPIC and EPICv2 copy number by Adam • 0

As described on the [github](https://github.com/hovestadtlab/conumee2) the way to do this is using array_type = c("EPIC", "EPICv2") This i…

Comment: graper 1.22 Build is Broken by shepherl 4.1k

This is not an appropriate place to report this. this is for usage questions. maintainers are notified automatically when it is failing on …

Comment: graper 1.22 Build is Broken by shepherl 4.1k

This post does not fit the theme of this forum.

Comment: Unbalanced experiment with multiple samples from each patient. by canarias • 0

Hi Aaron, I'm faced with an analysis that has basically the same problem as OP had, but is probably even more unbalanced: In most cases, I…

Votes

A: Unbalanced experiment with multiple samples from each patient.

Unbalanced experiment with multiple samples from each patient.

Answer: Vertical line at A=0, nothing else, on MA plot

Answer: GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct

Answer: Group-specific condition effects with individuals nested: matrix is not full ra

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