Showing : biomarkers • reset
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Job: Postdoc position - Genetic epi/statistical genetics
GWAS cancer biomarkers PRS
2.7 years ago Sarah • 0
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Job: Cancer Bioinformatician @ University of East Anglia - Norwich Medical School, UK
cancer postdoc biomarkers Biobase
3.9 years ago Daniel Brewer ▴ 100
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Job: Senior Research Associate in Bioinformatics @ University of East Anglia - Norwich Medical School, UK
Biobase bioinformatics biomarkers cancer
4.2 years ago Daniel Brewer ▴ 100
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Job: Part-time postdoc in Bioinformatics (0.5 FTE) @ UEA, Norwich, UK
cancer biomarkers bioinformatician Job
5.3 years ago Daniel Brewer ▴ 100
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How to identify Disease biomarkers " DNA sequences as biomarkers "
dnaseq pathway analysis protein biomarkers
7.1 years ago emadelhewihy • 0
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DESeq2 with 4 groups, 5 timepoints and more...!
deseq2 biomarkers
updated 7.5 years ago by ▴ 690 • written 7.5 years ago by • 0
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Adaptive Lasso and CrossValidation for SNV selection
adaptive-lasso snv biomarkers cv glmnet
8.2 years ago crichard • 0
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Job: PhD position at CRUK Manchester Institute
Prostate cancer noncoding rna biomarkers machine learning Job
8.9 years ago Hui Sun Leong ▴ 10
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Machine learning methods for feature selection and possible correlation with clinical data
machinelearning clinicaldata biomarkers data integration bioconductor
9.9 years ago svlachavas ▴ 840
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Possible Data integration of molecular data(transcriptomic) and imaging data from the same patients in R
data integration microarray bioconductor affymetrix biomarkers
updated 10.0 years ago by ★ 13k • written 10.0 years ago by ▴ 840
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Comment: how many significant figures are there in DESeq2 output by ATpoint ★ 4.7k
If you want consistency then use a fixed software environment like Docker, wirh fixed code and thresholds that make sense. Rounding to near…
Comment: Compare TCGA-PAAD with GTEx gene expression by Jane • 0
why aren't there any answers?
Comment: Too many significant genes when integrating gtex and tcga by Jane • 0
I encountered the same issue: too many DEGs after limma analysis. It is sad that until today we can still see the paper published where GTE…
Comment: how many significant figures are there in DESeq2 output by Matthew McCormack ▴ 180
Thank you for your reply. It is good to know that cutoff of 0.05 means less than 0.05. My concerns are about consistency and reproducibili…
Comment: DiffBind edgeR normalization --- why are the normalization factors all equal to by ATpoint ★ 4.7k
No, normalization factors from edgeR rather than size factors from DESeq2 are not proportional, it's a different concept and implementation…
Votes
A: Unbalanced experiment with multiple samples from each patient.
Unbalanced experiment with multiple samples from each patient.
Answer: Vertical line at A=0, nothing else, on MA plot
Answer: GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct
Answer: Group-specific condition effects with individuals nested: matrix is not full ra
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