Showing : biomarkers • reset
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Job: Postdoc position - Genetic epi/statistical genetics
GWAS cancer biomarkers PRS
2.6 years ago Sarah • 0
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Job: Cancer Bioinformatician @ University of East Anglia - Norwich Medical School, UK
cancer postdoc biomarkers Biobase
3.8 years ago Daniel Brewer ▴ 100
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Job: Senior Research Associate in Bioinformatics @ University of East Anglia - Norwich Medical School, UK
Biobase bioinformatics biomarkers cancer
4.1 years ago Daniel Brewer ▴ 100
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Job: Part-time postdoc in Bioinformatics (0.5 FTE) @ UEA, Norwich, UK
cancer biomarkers bioinformatician Job
5.2 years ago Daniel Brewer ▴ 100
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1.2k
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How to identify Disease biomarkers " DNA sequences as biomarkers "
dnaseq pathway analysis protein biomarkers
7.0 years ago emadelhewihy • 0
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1.1k
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DESeq2 with 4 groups, 5 timepoints and more...!
deseq2 biomarkers
updated 7.4 years ago by ▴ 690 • written 7.4 years ago by • 0
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Adaptive Lasso and CrossValidation for SNV selection
adaptive-lasso snv biomarkers cv glmnet
8.1 years ago crichard • 0
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Job: PhD position at CRUK Manchester Institute
Prostate cancer noncoding rna biomarkers machine learning Job
8.8 years ago Hui Sun Leong ▴ 10
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1.8k
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Machine learning methods for feature selection and possible correlation with clinical data
machinelearning clinicaldata biomarkers data integration bioconductor
9.7 years ago svlachavas ▴ 840
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Possible Data integration of molecular data(transcriptomic) and imaging data from the same patients in R
data integration microarray bioconductor affymetrix biomarkers
updated 9.9 years ago by ★ 13k • written 9.9 years ago by ▴ 840
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Answer: Is there a way to do DEG analysis across two batches sharing one sample only? by Michael Love 43k
The short answer is yes, you can use even a single sample to estimate the batch effect (and therefore control for it in otherwise confounde…
Comment: How to sort negative log2FC or FC in RNAseq for GSEA? by alserg ▴ 280
`NES > 0` means that your gene set has more genes with positive logFC/stat. In your case these genes should be up in Subset1. However, if y…
Answer: affymetrix by James W. MacDonald 67k
When posting it helps to think about the people you are asking for help. Your post is hidden within the dummy text that comes up when you i…
Answer: Problems with GSEA by Guido Hooiveld ★ 4.1k
The error `Duplicate values in names(stats) not allowed` (from `fgsea` that is used under the hood) shows that the input is not unique; in …
Answer: Error compiling Rbowtie2 in R-4.4 (Bioconductor 3.20 and probably 3.19) by ja.garcia • 0
It has been fixed by the Rbowtie2 maintainers in version 2.12.2. Thank you for the quick fix!
Votes
Answer: SingleCellExperiment convenience function for metadata+expression?
How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.
Answer: EdgeR Biological CVs
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
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