Showing : bioc2022 • reset
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News: Bioconductor Scientific or Informatic Technology Advancement Award!
Recognition Awards Bioc2022 Bioconductor
written 2.8 years ago by 4.1k
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News: Nominations for Bioconductor 2022 Awards!
Bioc2022 Awards Bioconductor Recognition
written 2.9 years ago by 4.1k
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News: Bioc2022 In-person attendance lottery deadline this Sunday
Registration Bioc2022 Conference
2.7 years ago shepherl 4.1k
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829
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News: Nominations for Bioconductor Technical Advisory Board is open
Board Organization Bioc2022 Bioconductor
2.7 years ago shepherl 4.1k
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771
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News: Junior Developer or New Package Developer Award
Recognition Awards Bioc2022 Bioconductor
2.7 years ago shepherl 4.1k
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797
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News: Bioconductor Long-term Contribution Award
Recognition Awards Bioc2022 Bioconductor
2.8 years ago shepherl 4.1k
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753
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News: Support Site Bioconductor Award
Recognition Awards Bioc2022 Bioconductor
2.8 years ago shepherl 4.1k
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830
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News: Bioconductor Community Engagement, Outreach, and Diversity Award
Bioc2022 Awards Bioconductor Recognition
2.8 years ago shepherl 4.1k
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News: Bioconductor Award for Outstanding Documentation
Bioc2022 Awards Bioconductor Recognition
2.8 years ago shepherl 4.1k
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News: Bioc2022 Submissions for talks, demos, workshops and poster now open! Deadline Tomorrow March 29!
presentation Conference bioc2022
3.0 years ago • updated 2.8 years ago shepherl 4.1k
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News: BioC2022 Seattle July 27-29 hybrid conference organizing committee
bioc2022 Conference
3.1 years ago Levi Waldron ★ 1.1k
11 results • Page 1 of 1
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Comment: Csaw normalization strategies - general inquiry by Luca • 0
Hello Aaron, About the IP efficiencies, yes definitely and for us, to complicate this experiment further, these batches were generated by …
Comment: How to compare expression levels of genes between scRNAseq and bulkRNAseq? by Quang NN ▴ 10
Thank you ATpoint for your response. In bulkRNAseq, I did have two cell types to compare. But, I want to also see if bulkRNAseq might have …
Answer: Why select top highly expressed genes based on normalized counts, but then plot by ATpoint ★ 4.6k
The choice of variable genes is typically part of a QC process. You select genes that in an unbiased fashion (unbiased because variance cal…
Comment: How to compare expression levels of genes between scRNAseq and bulkRNAseq? by ATpoint ★ 4.6k
My take is that RNA-seq (be it bulk or single-cell) is inherently relative. I don't think you can really "compare" the absolute expression …
Answer: Csaw normalization strategies - general inquiry by Aaron Lun ★ 28k
IIUC you're saying that 68 and 71 are more similar to each other than to all of the other replicates (more efficient IP, if I'm reading you…
Votes
Answer: Csaw normalization strategies - general inquiry
A: DESeq2 interaction term
Comment: Recount3 data correspond to TCGA data
Answer: DESeq2- merging technical vs biological replicates
Answer: SingleCellExperiment convenience function for metadata+expression?
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Popular Question to Robert Castelo ★ 3.4k
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