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News: EuroBioC2024 Carpentries workshops Sep 2-3
Community Workshop Bioconductor EuroBioC2024
9 months ago Maria Doyle ▴ 100
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News: course - single-cell RNAseq data analysis with R and Bioconductor
Workshop scRNAseq
22 months ago info ▴ 10
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News: Introduction to genomic data analysis with R and Bioconductor in Heidelberg, 12-13 September 2022
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2.7 years ago Laurent Gatto 1.6k
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News: Ascona Workshop “Biological systems: from first principles to data-​driven modelling and back” 27. 3. - 1. 4. 2022
theory modeling statistics ascona Workshop
3.5 years ago • updated 2.2 years ago Wolfgang Huber ★ 13k
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News: BioC Asia Virtual Meeting, 1-4 November 2021
Workshop Asia BioCAsia Conference
3.5 years ago Peter Hickey ▴ 750
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News: Terra / AnVIL R / Bioconductor Popup Workshops
AnVIL workshop Bioconductor Terra
4.0 years ago shepherl 4.1k
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News: Extended submission deadline for EuroBioc2020
talk workshop conference eurobioc poster
written 4.4 years ago by ▴ 350
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News: [CDSB] Workshop 2020: Building workflows with RStudio and Bioconductor for single cell RNA-seq analysis
CDSB Mexico Workshop News
5.1 years ago Leonardo Collado Torres ★ 1.1k
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News: Bioinformatics Summer School - July 2019 - UCLouvain (Belgium)
RNAseq deseq2 proteomics transcriptomics workshop News
written 6.1 years ago by 1.6k
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News: Ascona Workshop 2019 - Statistical Challenges in Medical Data Science, 16-21 June 2019
workshop News
6.5 years ago Wolfgang Huber ★ 13k
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News: Advanced R programming course - EMBL Heidelberg, 3-4 April 2017
course workshop News
8.2 years ago • updated 8.0 years ago Laurent Gatto 1.6k
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News: Workshop on Statistical Challenges in Single-Cell Biology, April 30 to May 5, 2017, at Villa Monte Verita, Ascona
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8.6 years ago Wolfgang Huber ★ 13k
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News: Workshop: microRNA Analysis Using Next-Generation Sequencing - From microRNA profiling and prediction to extensive downstream analyses
Workshop Course News
8.8 years ago adele.feuerstein • 0
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News: Workshop: Clinical Bioinformatics as a Service, at ECCB 2016 - register till 29 May
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9.0 years ago • updated 8.9 years ago Wolfgang Huber ★ 13k
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News: Course: Analysis of RNA-seq and ChIP-seq data, March 29th - April 1st, Oeiras, Portugal
Course workshop News
9.1 years ago Mark Dunning ★ 1.1k
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News: European Bioconductor Developers Meeting: Cambridge 7/8th December 2015
developers conference workshop News
updated 9.5 years ago by 1.6k • written 9.6 years ago by ★ 1.1k
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News: C1omics: single-cell omics methods and applications, Manchester 24-25 Nov 2015
single cell conference workshop News
9.5 years ago Wolfgang Huber ★ 13k
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News: Workshop Statistical Learning of Biological Systems - Ascona, Switzerland, May 31 to June 5, 2015
Statistical Learning Workshop News
10.6 years ago • updated 10.2 years ago Wolfgang Huber ★ 13k
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News: European Bioconductor Developers' Meeting 12th-13th January 2015, Heidelberg
developers workshop conference meeting News
10.5 years ago Wolfgang Huber ★ 13k
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News: Course Announcement - Next Generation Data Analysis with R/Bioc (Dec 5-8, 2014)
workshop ngs training News
10.5 years ago Thomas Girke ★ 1.7k
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News: Workshop Statistical Methods for Post Genomic Data in Munich, February 12-13, 2015
statistics workshop news News
10.5 years ago gagneur ▴ 10
21 results • Page 1 of 1
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Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k
Underpowerment and notable noise/variability, that's the answer.
Comment: DESeq - help with pair wise comparisons by ATpoint ★ 4.8k
It's exactly this, no? https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#group-specific-condition-effect…
Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0
Sorry for the repetitive questions! I'm actually just trying to understand it better so that I can explain to the wet lab biologists in my …
Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k
> Would you advice against running deseq separately for each comparison? You're reducing power even more. Look, since you appear a bit "de…
Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0
Thank you for the quick reply. Rep 1 is lower than rep 2 in only one group (V_CD45), is this sufficient to affect the results even if I inc…
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Answer: Improving performance of edgeR and limma while adjusting for multiple confounder
Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin
Two EPIC Methylation Array Analysis Questions
How to get DMR for Infinium methylation EPIC v2
A: GEOquery Fails to Download Series Matrix File
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