Bioconductor Wald

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votes

490

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DESeq2 LRT Wald

updated 8 weeks ago by James W. MacDonald 67k • written 8 weeks ago by Eric • 0

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1.1k

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DESeq2 wald stat

updated 2.1 years ago by Peter Hickey ▴ 740 • written 2.1 years ago by eve.olszanowski • 0

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1.8k

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etLRT WALD edgeR DESEq

updated 3.1 years ago by Michael Love 42k • written 3.1 years ago by aiswaryabioinfo • 0

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851

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deseq2 LRT wald

updated 4.6 years ago by Kevin Blighe ★ 4.0k • written 4.6 years ago by jnaviapelaez ▴ 10

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1.1k

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GENESIS zscore wald

updated 5.0 years ago by Stephanie M. Gogarten ▴ 870 • written 5.0 years ago by lassana.a.samarakoon ▴ 10

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2.0k

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deseq2 LRT WALD

updated 5.1 years ago by Michael Love 42k • written 5.1 years ago by annesoalvarez • 0

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1.4k

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deseq2 ribosome profiling wald lrt

updated 5.7 years ago by Michael Love 42k • written 5.7 years ago by indrik.wijaya ▴ 20

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4.2k

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rnaseq deseq2 lrt wald differential gene expression

updated 2.5 years ago by chm • 0 • written 7.0 years ago by chrysanthi.taxiarchi12 • 0

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2.8k

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deseq2 wald lrt genes significance

updated 8.3 years ago by Michael Love 42k • written 8.3 years ago by aziza ▴ 20

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19k

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deseq2 wald

updated 2.9 years ago by Michael Love 42k • written 9.6 years ago by deena ▴ 20

10 results • Page 1 of 1

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Comment: How should I run ssGSEA Hallmark Enrichment Analysis? by Ginny • 0

I think the other side of this question is that the non protein coding genes would be in the "background", they would influence the ranking…

Comment: ISO a solution to rank-order introns by transcript by James W. MacDonald 67k

There's an error in the last line. Note that `sapply(lengths(z), seq_len)` will return a `list` because the lengths vary. We need a vector,…

Comment: BiomaRt - improved access to Ensembl ? by Mike Smith ★ 6.5k

Why do you want to use `useMart()` rather than `useEnsembl()`? They are essentially the same (`useEnsembl()` will eventually call `useMart(…

Comment: Installing Bioconductor packages in Docker by devarti.mahakalkar • 0

I have installed BiocManager on my base image rather than having it as base image. RUN Rscript -e "install.packages('BiocManager', re…

Comment: Meta-analysis on RNA-seq data sets by Travis • 0

Thank you for your suggestions and explanation of your approach!

Votes

Answer: ISO a solution to rank-order introns by transcript

Answer: Issues with retrieving Zea mays genes dataset: biomaRt error: looks like we're c

Answer: addPatternDensity in 'qsea' takes too much time

Awards • All

Popular Question to Robert Castelo ★ 3.4k

Scholar to James W. MacDonald 67k