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UniProt
•
reset
2
votes
5
replies
4.5k
views
UniprotKB AC/ID to Entrez ID Conversion
ID
Uniprot
EntrezID
2.7 years ago
tom.kloter
• 0
3
votes
11
replies
6.2k
views
GO enrichment analysis on Solanum lycopersicum proteomics dataset (UniProt IDs)
clusterProfiler
AnnotationHub
GO
uniprot
updated 11 months ago by
Guido Hooiveld
★ 4.1k • written 4.0 years ago by
Alberto
• 0
1
vote
1
reply
1.2k
views
UniProt.ws - Speeding up select() for data retrieval
UniProt.ws
UniProt
updated 4.2 years ago by
James W. MacDonald
67k • written 4.2 years ago by
JavierM
• 0
2
votes
3
replies
1.2k
views
Uniprot and UniProt.ws
Uniprot
Annotation
Identifiers
5.7 years ago
Juliet Hannah
▴ 360
4
votes
2
replies
1.1k
views
drawProteins from Uniprot entry (missing chain information)
drawProteins
uniprot
updated 6.0 years ago by
James W. MacDonald
67k • written 6.0 years ago by
mblango
• 0
1
vote
4
replies
1.5k
views
UniProt.ws non-functional or abandoned?
uniprot.ws
uniprot
uniprot accessions
updated 6.2 years ago by
James W. MacDonald
67k • written 6.2 years ago by
balin
• 0
0
votes
2
replies
1.3k
views
Error retrieving data with biomaRt
biomart
r
getbm
uniprot
6.9 years ago
lluex.rova
• 0
0
votes
1
reply
1.4k
views
UniProt.ws - single database for two species
uniprot.ws
uniprot
updated 7.2 years ago by
James W. MacDonald
67k • written 7.2 years ago by
l.nilse
• 0
0
votes
1
reply
2.0k
views
org.Mm.eg.db UNIPROT missing values
Annotation
mouse
UNIPROT
updated 7.3 years ago by
Mike Smith
★ 6.6k • written 7.3 years ago by
julie.chevalier
• 0
1
vote
7
replies
2.4k
views
UniProt.ws report 1:many mappings in a single row
uniprot.ws
UniProt
annotation
8.2 years ago
l.nilse
• 0
0
votes
3
replies
1.3k
views
Accessing feature data of a Malus domestica Nimblegen microarray
nimblegen
Biomart
Uniprot
updated 8.2 years ago by
Gordon Smyth
52k • written 8.2 years ago by
theobroma22
▴ 10
4
votes
1
reply
1.9k
views
Converting Protein Accessions Into Protein Symbols
uniprot
uniprot.ws
8.9 years ago
Dario Strbenac
★ 1.5k
2
votes
4
replies
3.3k
views
UniProt.ws version 2.10.2
uniprot.ws
subcellular location
uniprot
8.9 years ago
DHS
• 0
0
votes
3
replies
1.6k
views
Anotations Score of uniprot. ws
uniprot.ws
uniprot
updated 9.1 years ago by
James W. MacDonald
67k • written 9.1 years ago by
cerikahp
• 0
2
votes
2
replies
1.5k
views
Is there a package that has Uniprot protein descriptions?
uniprot.ws
uniprot
uniprot accessions
software error
updated 9.2 years ago by
James W. MacDonald
67k • written 9.2 years ago by
john
▴ 10
2
votes
14
replies
4.3k
views
Unimart not available in 2015?
biomart
uniprot
unimart
9.2 years ago
john
▴ 10
1
vote
4
replies
4.3k
views
problem with retrieving UniProt annotation data
uniprot.ws
uniprot
updated 9.9 years ago by
Marc Carlson
★ 7.2k • written 9.9 years ago by
Guido Hooiveld
★ 4.1k
0
votes
6
replies
2.6k
views
converting UniProt to SGD ids using UniProt.wd
uniprot.ws
uniprot
ensembl
updated 10.0 years ago by
Marc Carlson
★ 7.2k • written 10.0 years ago by
Joseph Barry
▴ 160
0
votes
2
replies
1.7k
views
Missing ensembl_ids in biomaRt uniprot query
biomaRt
uniprot
ensembl
updated 10.1 years ago by
me
• 0 • written 10.1 years ago by
António Miguel de Jesus Domingues
▴ 510
19 results • Page
1 of 1
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Replies
Comment: EdgeR Biological CVs
by
ATpoint
★ 4.6k
"Joseph" is a spam bot...
Comment: Problems with oarfish + tximport + swish
by
Im
• 0
Office ta kemon
Answer: How to sort negative log2FC or FC in RNAseq for GSEA?
by
ATpoint
★ 4.6k
GSEA asks whether there are general shifts in gene expression towards certain terms. Hence, you would not split your results tables but ord…
Comment: EdgeR Biological CVs
by
James
• 0
Thank you Gordon and Joseph. I presume question (1) would be answered by using a prior G0 of 0? For question (2), I was expecting a biolog…
Comment: EdgeR Biological CVs
by
Joseph
▴ 10
I believe the published study provides answers to your questions. Yunshun Chen and Pedro Baldoni's recent papers on edgeR may also be of in…
Votes
How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.
Answer: EdgeR Biological CVs
Comment: EdgeR Biological CVs
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
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Dario Strbenac
★ 1.5k
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Gordon Smyth
52k
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Bob
▴ 10
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shepherl
4.1k
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James W. MacDonald
67k
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