Bioconductor Translation

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event translation community

2.5 years ago kozo.nishida • 0

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984

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Translation Biostrings

3.4 years ago emmanuel.verde2939 • 0

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customprodb translation

updated 6.4 years ago by xiaojing.wang ▴ 50 • written 6.7 years ago by georges.bedran • 0

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point mutation aminoacid translation

updated 15 months ago by jtremblay514 • 0 • written 6.5 years ago by chandu.ncbs • 0

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translation

updated 7.9 years ago by Martin Morgan 25k • written 7.9 years ago by XIA.PAN ▴ 20

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convert translation

written 10.1 years ago by tomas.bjorklund ▴ 20

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translation pairwisealignment

8.4 years ago igferres • 0

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genomicranges genomicfeatures translation

updated 11 months ago by russ.bainer ▴ 10 • written 9.1 years ago by madsheilskov ▴ 10

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cancer translation ngs genomics Job

9.8 years ago jhjohnsn • 0

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Comment: Why did PCA plots look exactly the same after adjusting for batch covariate in D by James W. MacDonald 67k

How you analyze your data is up to you. But do note that Subset * Conditions implies that you want to find genes that respond to stimulus d…

Comment: MBDseq analysis using qsea package by kf • 0

Hi Matthias, Happy new year! I wondered if it is possible to retrieve normalized value from each samples? makeTable seems only return beta…

Comment: Why did PCA plots look exactly the same after adjusting for batch covariate in D by Quang • 0

Hi, James. I forgot to mention, but yes, I did run `DESeq2::DESeq()`. So, I ran `DESeq2::DESeqDataSetFromHTSeqCount`, then `DESeq2::DESeq()…

Answer: Why did PCA plots look exactly the same after adjusting for batch covariate in D by ATpoint ★ 4.6k

It's an FAQ in the vignette: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#why-after-vst-are-there-s…

Comment: Deseq2, enrichGO and ensembl ID by James W. MacDonald 67k

I am not sure I understand. You say that a unique Ensembl ID maps to multiple gene symbols. That doesn't mean you have two genes (it's just…

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A: Trajectory analysis for single cell sequencing

Answer: Annotation with org.Hs.eg.db Genome Build 38

Answer: Considerations behind the choice of RNAseq Differential Expression Analysis Tool

A: goana limma- extract list of DE genes and genes in the enriched GO terms?

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