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News: Translation Hackathon (community event) announcement
event translation community
2.8 years ago kozo.nishida • 0
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Bioconductor: Ambiguous Amino Acids & Gap Sequences
Translation Biostrings
3.7 years ago emmanuel.verde2939 • 0
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1.2k
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aaVariation function bug (Methonine instead of Leucine)
customprodb translation
updated 6.7 years ago by ▴ 50 • written 7.0 years ago by • 0
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1.1k
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Point mutation to corresponding amino acid
point mutation aminoacid translation
updated 18 months ago by • 0 • written 6.8 years ago by • 0
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2
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6.6k
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translate DNA sequence to Amino acid sequence in a dataframe
translation
updated 8.1 years ago by 25k • written 8.1 years ago by ▴ 20
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How to reverse translate amino acid sequence into mammalian codon optimised cDNA
convert translation
written 10.4 years ago by ▴ 20
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Translate to aminoacid, align pairwise and un-translate back to DNA
translation pairwisealignment
8.7 years ago igferres • 0
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How to find the amino acid codon corresponding to a translated genomic position
genomicranges genomicfeatures translation
updated 14 months ago by ▴ 10 • written 9.4 years ago by ▴ 10
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Job: Associate Scientist - NGS Informatics @ AstraZeneca (Metro Boston, MA)
cancer translation ngs genomics Job
10.1 years ago jhjohnsn • 0
9 results • Page 1 of 1
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Answer: Model performance for spline modelling of RNA-seq timecourses in edgeR by Gordon Smyth 52k
I don't understand your question, because there is no difference between limma or glmFit or glmQLFit in terms of spline modeling or the tes…
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks by Luca • 0
Perhaps edgeR's upperquartile normalization handles this better, the MA looks a lot more centered at 0 ![enter image description here][1]…
Answer: DESeq2 - am I extracting results incorrectly? by James W. MacDonald 68k
If I assume that Followup gets converted to T3 and Treatment to LowSug somewhere along the line (and therefore GroupTreatment.Followup is G…
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks by Luca • 0
I noticed the dual populations as well, when using csaw this is controlled for. Regarding the DE profile, given this disease condition we e…
Answer: Origin of the labels for the SingleCellMultiModal dataset by ATpoint ★ 4.8k
If you check the underlying code a bit you find that there is a file with data sources: ```r modes_file <- system.file("extdata", "metadat…
Votes
Answer: Improving performance of edgeR and limma while adjusting for multiple confounder
Comment: DESeq - help with pair wise comparisons
Answer: Is random access by row index possible for an indexed VCF file?
Answer: Is random access by row index possible for an indexed VCF file?
Answer: SingleR with multiple single cell references
Awards • All
Popular Question to Gordon Smyth 52k
Popular Question to pcantalupo ▴ 10
Popular Question to bioinformaticssrm2011 • 0
Popular Question to slizchap • 0
Scholar to Aaron Lun ★ 28k
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