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Sushi
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926
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Plotting bed8 with Sushi possible?
sushi
bed
6.2 years ago
maltethodberg
▴ 180
0
votes
0
replies
830
views
plotGenes command Sushi
sushi
plotGenes
6.9 years ago
portia.mcghan
• 0
1
vote
0
replies
1.1k
views
Issues with Sushi manhattanPlot function, cannot plot p-values
sushi
8.1 years ago
snamjoshi87
▴ 40
0
votes
1
reply
1.3k
views
plotBed R data frame - last line plotted with line 1
sushi
plotBed
data.frame
8.6 years ago
waqasnayab
• 0
1
vote
1
reply
1.3k
views
Adding legends to sushi plots produced using plotBed function
sushi
plotBed
updated 8.7 years ago by
dphansti
▴ 10 • written 8.8 years ago by
Dimitris Polychronopoulos
▴ 80
0
votes
1
reply
1.1k
views
Sushi example data not correct?
Sushi
updated 8.7 years ago by
dphansti
▴ 10 • written 8.7 years ago by
Till
▴ 30
0
votes
3
replies
2.2k
views
Plotting gene region using Sushi
R
sushi
updated 8.8 years ago by
dphansti
▴ 10 • written 8.8 years ago by
javier.mendoza
• 0
0
votes
2
replies
1.8k
views
ploting HiC data with Sushi
sushi
updated 9.2 years ago by
Steve Lianoglou
★ 13k • written 9.2 years ago by
Bogdan
▴ 670
8 results • Page
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Answer: Deseq2 res Function
by
Michael Love
43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
Answer: ANOVA like approach of edgeR
by
Gordon Smyth
51k
You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…
Answer: Create Illmina bead summary data
by
Gordon Smyth
51k
GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…
Comment: Help with RSEM counts: do I transpose matrix?
by
NB
• 0
OK thank you.
Comment: Help with RSEM counts: do I transpose matrix?
by
James W. MacDonald
67k
You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.
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Answer: Deseq2 res Function
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
Answer: ANOVA like approach of edgeR
Answer: ANOVA like approach of edgeR
Comment: ANOVA like approach of edgeR
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