Showing : Statistics • reset
0
votes
0
replies
558
views
Job: Statistics Lectureships at St Andrews
JobPosting computational statistics
13 months ago Andy Lynch ▴ 120
0
votes
0
replies
538
views
multipollutant models
statistics Regression r limma
16 months ago Jitendra ▴ 10
0
votes
1
reply
658
views
DEseq2 : Complex design with a mixture of male and female mice
statistics DESeq2
updated 16 months ago by 43k • written 16 months ago by • 0
1
vote
1
reply
606
views
Further analysis after limma regression output
statistics Epigenetics limma
updated 18 months ago by 68k • written 18 months ago by ▴ 10
1
vote
1
reply
2.8k
views
FPKM t-test vs DEseq2
DESeq2 statistics rna-seq
updated 24 months ago by ★ 4.8k • written 24 months ago by ▴ 10
0
votes
3
replies
1.8k
views
batch effect in EPIC array data
statistics Epigenetics R
updated 2.1 years ago by ▴ 760 • written 2.1 years ago by ▴ 10
0
votes
0
replies
913
views
Job: PhD position in Bioinformatics in Jena
Statistics ComputationalBiology Aging MachineLearning
2.2 years ago alena.vanboemmel • 0
0
votes
2
replies
1.1k
views
Results analysis of differential gene expression using DESeq2 package
RnaSeqSampleSize statistics DESeq2
updated 2.3 years ago by ★ 1.4k • written 2.3 years ago by • 0
1
vote
0
replies
953
views
Statistical test for genomic annotation by ChIPseeker
statistics PeakAnnotation ChIPseeker GuangchuangYu
2.7 years ago arisarkar88 ▴ 40
1
vote
0
replies
1.0k
views
Job: Lecturer in Statistics - School of Mathematics and Statistics - University of St Andrews
computational teaching statistics research
2.7 years ago Andy Lynch ▴ 120
1
vote
0
replies
1.1k
views
Job: Research Fellow in Prostate Cancer Proteomics (Bioinformatics/Stats/Data Analysis) - University of St Andrews
Multiomics Proteomics Cancer Statistics Bioinformatics
2.7 years ago Andy Lynch ▴ 120
0
votes
6
replies
1.8k
views
regression analysis for epic array methylation data using limma
limma Epigenetics STATISTICS R
2.9 years ago Jitendra ▴ 10
0
votes
3
replies
1.9k
views
Reading large file (15GB) in R
R Rstudio Bioconducter statistics
updated 3.1 years ago by 21k • written 3.2 years ago by ▴ 10
3
votes
5
replies
1.6k
views
P adjusted values in Deseq2
DESeq2 Statistics
written 4.2 years ago by • 0
0
votes
2
replies
1.3k
views
News: Ascona Workshop “Biological systems: from first principles to data-​driven modelling and back” 27. 3. - 1. 4. 2022
theory modeling statistics ascona Workshop
3.5 years ago • updated 2.2 years ago Wolfgang Huber ★ 13k
0
votes
0
replies
1.3k
views
Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
singlecellRNA-Seq pathview statistics R
4.0 years ago • updated 3.9 years ago Luo Weijun ★ 1.6k
0
votes
0
replies
1.2k
views
Job: Bioinformatician at MiroBio, Oxford, UK
Transcriptomics Bioconductor Statistics Job Biocon
4.1 years ago m.jackson • 0
0
votes
0
replies
1.2k
views
Job: Scientist/Senior Scientist, Statistical Geneticist
Sequencing Genetics GeneticsPed statistics
4.2 years ago António Miguel de Jesus Domingues ▴ 510
0
votes
0
replies
1.4k
views
Job: Proteomics Bioinformatician
JobPosting Proteomics Statistics Job
4.3 years ago Laura • 0
0
votes
0
replies
1.1k
views
Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
R statistics pathview singlecellRNA-Seq
4.4 years ago • updated 4.0 years ago Luo Weijun ★ 1.6k
1
vote
2
replies
1.5k
views
Re-calculation of Padj (P adjusted value)
statistics Benjamini–Hochberg procedure deseq2
updated 4.5 years ago by 43k • written 4.5 years ago by ▴ 60
2
votes
0
replies
1.1k
views
Job: Multiple open positions in biomedical statistics at Eurac Research, Italy
epidemiology statistics bioinformatics Job
4.5 years ago Johannes Rainer ★ 2.1k
0
votes
0
replies
973
views
Job: Two Bioinformatics Fellowship Positions at US EPA
bioinformatics toxicology Job sequenicng statistics
4.7 years ago • updated 4.4 years ago whduke • 0
0
votes
0
replies
2.1k
views
Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
6.7 years ago • updated 4.4 years ago Luo Weijun ★ 1.6k
1
vote
0
replies
1.2k
views
Job: Post-Doctoral Research Fellow, Cancer Genomics
genomics seattle bioinformatics data science statistics Job
4.9 years ago Fred Hutch (Recruiting) ▴ 40
3
votes
0
replies
2.6k
views
Job: Postdoctoral Scientist, Statistical Bioinformatics and Proteomics, WEHI Australia
job proteomics Job statistics
5.4 years ago • updated 5.3 years ago Gordon Smyth 52k
0
votes
0
replies
1.5k
views
Job: Postdoc and PhD student in Bioinformatics/Biostatistics
NGS R statistics genomics big data Job
6.2 years ago • updated 5.3 years ago Luo Weijun ★ 1.6k
0
votes
1
reply
1.1k
views
How to handle batch effect and interaction with experimental variables
deseq2 statistics differential expression
5.4 years ago A • 0
0
votes
1
reply
1.0k
views
Exclude interaction terms from the design
deseq2 statistics modelling
updated 5.5 years ago by 43k • written 5.5 years ago by • 0
2
votes
2
replies
4.0k
views
How adjusted p-values are calculated in limma
limma r transcriptomics FDR statistics
updated 5.5 years ago by 52k • written 5.5 years ago by ▴ 10
0
votes
0
replies
1.3k
views
Proteomics data analysis with DEP no replicates
DEP Proteomics Statistics limma
5.6 years ago tatabox • 0
3
votes
3
replies
1.9k
views
Using alternative LFC shrinkage methods for computing p-values in DESeq2
deseq2 apeglm statistics
updated 5.8 years ago by 43k • written 5.8 years ago by • 0
0
votes
1
reply
1.2k
views
Efficient resampling in GENESIS or another Bioconductor GWAS package to obtain empirical p-values?
GENESIS GWAS resampling resample statistics
6.2 years ago naglemi ▴ 10
0
votes
0
replies
1.0k
views
package for mismatch distribution?
genetics statistics
6.2 years ago myriam.croze07 • 0
1
vote
6
replies
3.4k
views
DESeq2 unbalanced sample size
deseq2 bioconductor bioinformatics statistics
updated 2.1 years ago by 43k • written 6.3 years ago by • 0
1
vote
2
replies
1.2k
views
Newbie to all of this
bioconductor statistics
6.5 years ago sportwoo • 0
8
votes
8
replies
8.3k
views
Voom transformation from counts and normalization to negative values
rnaseq voom limma tcga statistics
updated 6.5 years ago by ★ 7.9k • written 6.5 years ago by ▴ 60
1
vote
2
replies
1.3k
views
What to do with microarray probes that catch multiple genes?
affymetrix microarrays microarray probe statistics
updated 6.6 years ago by 68k • written 6.6 years ago by • 0
1
vote
4
replies
1.5k
views
Do the gene set statistics of the ROAST paper correspond to those implemented in the .roastEffects R function?
limma roast statistics source code gene set testing
6.6 years ago Andrea Carenzo • 0
0
votes
2
replies
1.4k
views
comparing two GOstats result lists
gostats statistics
updated 6.8 years ago by 68k • written 6.8 years ago by ▴ 30
1
vote
0
replies
1.4k
views
Job: Statistical Research Associate
biostatistics statistics sas git assay Job
6.9 years ago Fred Hutch (Recruiting) ▴ 40
0
votes
0
replies
1.5k
views
DSS DMLTest Prior Estimate of theta dispersion
DSS dmltest bayesian statistics methylation
7.0 years ago floriandeckert ▴ 30
0
votes
0
replies
1.4k
views
News: SCANGEN: Single-cell cancer genomics workshop at ISMB 2018
single cell cancer genomics statistics News
7.0 years ago kieranrcampbell ▴ 50
0
votes
0
replies
1.5k
views
Two questions about pathifier package
pathways statistics microarray
7.2 years ago arronar • 0
28
votes
7
replies
13k
views
Effect of lfcThreshold on p-value in DESeq2
deseq2 rnaseq statistics
updated 18 months ago by ▴ 10 • written 7.5 years ago by ▴ 40
2
votes
4
replies
1.5k
views
Removing batch effect on edgeR when interactons are looked at
rnaseq edger statistics model matrix
updated 7.5 years ago by ★ 13k • written 7.5 years ago by ▴ 90
0
votes
0
replies
1.4k
views
Assigning stats to differential peak locations relative to TSS
chipseeker chipseq statistics
7.5 years ago rbronste ▴ 60
0
votes
0
replies
1.8k
views
Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
8.1 years ago • updated 8.0 years ago Luo Weijun ★ 1.6k
1
vote
2
replies
2.3k
views
how to perform pre ranked GSEA in R?
r microarray statistics GSEA
updated 8.1 years ago by • 0 • written 10.1 years ago by ▴ 80
0
votes
0
replies
1.5k
views
Job: Bioinformaticist, Research Programmer
R genomics statistics Job
8.1 years ago radel • 0
50 results • Page 1 of 1
Recent ...
Replies
Comment: DESeq2 - human data, weird results, troubleshooting by bd2000 ▴ 30
I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…
Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin by James W. MacDonald 68k
The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…
Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k
> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…
Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0
Thank you so much for sharing the link.
Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0
I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…
Votes
Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin
Two EPIC Methylation Array Analysis Questions
How to get DMR for Infinium methylation EPIC v2
A: GEOquery Fails to Download Series Matrix File
Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species
Awards • All
Popular Question to bd2000 ▴ 30
Popular Question to shepherl 4.1k
Scholar to Michael Love 43k
Popular Question to Rob • 0
Popular Question to Gordon Smyth 52k
Locations • All
United States, 20 minutes ago
United States, 53 minutes ago
India, 1 hour ago
United Kingdom, 2 hours ago
Germany, 3 hours ago
Traffic: 692 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6