Showing : SingleCellData • reset
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How to adjust for Cell Type Differences between groups in Pseudo-Bulk Differential Gene Expression analysis in scRNA-seq?
SingleCellData DESeq2 pseudobulk sing
updated 5 weeks ago by 68k • written 5 weeks ago by • 0
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114
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Help with mouse cell type annotation
annotation SingleR mouse SingleCellData scRNAseq
6 weeks ago Muhammad • 0
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2
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769
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Integration of Single Cell Experiments with batchelor::fastMNN
fastMNN SingleCellData BatchEffect batchelor
5 months ago José • 0
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1
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518
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Is CEMiTool for gene coexpression analysis suitable for single cell RNA Seq data?
SingleCellData CEMiTool
updated 7 months ago by 68k • written 8 months ago by • 0
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545
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Dimensionality reduction visualization
imcRtools SingleCellData imcdatasets SpatialWorkflow
updated 14 months ago by 68k • written 14 months ago by • 0
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2.2k
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Easiest way to convert read10xMolInfo data into a dataframe in R with gene labels as row names
tidyverse R SingleCellExperiment SingleCellData
written 16 months ago by • 0
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2
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748
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Fail to annotate chromosome data to single cell sequencing data obtained from cellranger
AnnotationHubSoftware SingleCellData annotationTools
updated 16 months ago by ★ 4.8k • written 16 months ago by • 0
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3
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1.1k
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insufficient unique points for computing knee/inflection points
DropletUtils SingleCellData
updated 20 months ago by ★ 4.8k • written 20 months ago by • 0
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2
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1.7k
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Error in SingleR, no common genes between 'test' and 'ref'
singleR SingleCellExperiment SingleCellData
21 months ago Matvii Mykhailichenko • 0
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Job: Research Assistant - Computational Biology/Immunology, Memorial Sloan Kettering, New York
SingleCellData ComputationalBiology
24 months ago Chrysothemis ▴ 10
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Job: Job as a bioinformatician in Hamburg, Germany
DimensionReduction SingleCellData multiomics MachineLearning
2.3 years ago Diego's • 0
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752
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Gene Id duplicated
SingleCell SingleCellData
updated 2.5 years ago by ★ 4.8k • written 2.5 years ago by • 0
2
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2
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1.1k
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How to detect LacZ tagged cells from single cell
SingleCell SingleCellExperiment SingleCellWorkflow SingleCellData
2.6 years ago k1m ▴ 20
2
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4
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1.3k
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Summary of library size factor is all equal to one
SingleCell SingleCellData SingleCellWorkflow SingleCellExperiment
2.6 years ago Romina • 0
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1.3k
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Splatter (unknown correlation between gene expression level in different cell types)
SingleCellData splatter
updated 2.9 years ago by ▴ 50 • written 2.9 years ago by • 0
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1.1k
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Running PLAGE gets killed
GSVA SingleCellData
updated 3.0 years ago by ★ 3.4k • written 3.0 years ago by • 0
2
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1
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2.2k
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Convert AnnotatedDataFrame S4 object from GEO datasets to Seurat Object
biobase SingleCellData seurat SingleCell
updated 3.2 years ago by 68k • written 3.2 years ago by • 0
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3
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2.3k
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10X FeatureBarcode producing too many "cells"
SingleCellExperiment DropletUtils SingleCellData
updated 4.2 years ago by ★ 28k • written 4.2 years ago by ▴ 10
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[Geometry Dash Lite][1] is the free version of the famous Geometry Dash series. It was made by RobTop Games and lets players enjoy the thri…
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I was unable to find the overlapping genome because it is too old to use [ragdoll archers][1] [1]: https://ragdollarchers.com/
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Two EPIC Methylation Array Analysis Questions
How to get DMR for Infinium methylation EPIC v2
A: GEOquery Fails to Download Series Matrix File
Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species
what the test method for enrichGO in clusterProfiler?
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