Bioconductor Segmentation

Showing : Segmentation • reset

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741

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BAM Segmentation CINdex VCF Data

2.6 years ago raven1306 • 0

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1.0k

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PureCN CNV CNA segmentation calculateTangentNormal

updated 5.3 years ago by markus.riester ▴ 130 • written 5.3 years ago by sruddy17 • 0

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1.0k

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segmentation reference CNA TCGA

6.2 years ago jlarsen728 • 0

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1.5k

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classification segmentation cell types image analysis crimage

6.7 years ago Jenny.chien • 0

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1.9k

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TCGA Cancer dnacopy segmentation

updated 7.8 years ago by markus.riester ▴ 130 • written 7.8 years ago by Luisa672 • 0

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1.6k

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dnacopy segmentation CBS

updated 8.2 years ago by Venkat Seshan ▴ 30 • written 8.2 years ago by W. C. ▴ 10

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1.4k

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gcrma segmentation fault segfault

updated 9.0 years ago by James W. MacDonald 68k • written 9.0 years ago by kazi • 0

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Answer: how to use `arrayWeightsQuick()`? by Gordon Smyth 52k

Yes, that is the correct way to use `arrayWeightsQuick`. Thanks for pointing out that there is still a reference to `arrayWeightsSimple` i…

Answer: fast apply on RleList by story.benjamin ▴ 20

solved with viewApply (code is simplified below) + map reduce on chrs test.split <- split(test.gr,seqnames(test.gr)) final.st…

Comment: fast apply on RleList by story.benjamin ▴ 20

Hi James, thanks for the reply. I ultimately figured it out ... viewApply showed a massive speed increase for me (see other answer) - I was…

Answer: fast apply on RleList by James W. MacDonald 68k

There is already a 'mean' function that will dispatch on an `RleList` that you can use. I don't have a long `RleList` in hand to test it on…

Answer: Custom CDF creation for HTA 2.0 array using GTF annotation by James W. MacDonald 68k

It doesn't appear that Manhong Dai is working at UM any longer, and the webpage appears to have fallen into disrepair (for example, the lin…

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Having Trouble Using CNE12() and CNE21() in CNEr

Answer: Having Trouble Using CNE12() and CNE21() in CNEr

annotation EpicV2

Answer: fast apply on RleList

Answer: BiocParallel_1.40.1.tar.gz not available

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Popular Question to Ariel Chernomoretz ▴ 170