Bioconductor Sample Size

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893

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deseq2 sample size

updated 5.4 years ago by Michael Love 42k • written 5.4 years ago by kel.chee86 • 0

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1.3k

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deseq2 nbinomLRT sample size biocparallel

updated 5.6 years ago by davide risso ▴ 950 • written 5.6 years ago by mcalgaro93 • 0

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2.1k

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limma sample size microarrays statistical power

6.1 years ago eleonoregravier ▴ 70

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1.6k

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atac-seq sample size Peak Normalize

6.3 years ago jaime.alvarez.benayas • 0

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4.8k

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deseq2 deseq sample size

6.6 years ago MrHodor • 0

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1.6k

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csaw differential binding analysis sample size independent filtering statistical power

updated 6.7 years ago by Aaron Lun ★ 28k • written 6.7 years ago by zhangly811 • 0

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1.8k

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edger pvalue sample size

updated 7.9 years ago by Aaron Lun ★ 28k • written 7.9 years ago by Venu Pullabhatla ▴ 40

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2.2k

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rnaseqpower sspa sample size sequencing complex-design

updated 8.2 years ago by m.van_iterson ▴ 20 • written 8.3 years ago by roser.navarro • 0

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15k

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WGCNA Sample Size Outliers

updated 8.7 years ago by mh.manoj • 0 • written 9.2 years ago by brohawndg ▴ 150

9 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360

So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!

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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?

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