Bioconductor SVAseq

Showing : SVAseq • reset

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704

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DESeq2 Normalisation Bulkrnaseq Svaseq

10 months ago BioinfGuru ▴ 70

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928

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RUVSeq svaseq

2.8 years ago Tongjun • 0

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1.4k

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RNASeq sva svaseq

updated 3.2 years ago by James W. MacDonald 68k • written 3.2 years ago by Bex • 0

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1.1k

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limma sva Leafcutter SVAseq

3.6 years ago • updated 3.5 years ago georgia.katsoula ▴ 40

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1.0k

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sva svaseq surrogate variable analysis

updated 5.0 years ago by James W. MacDonald 68k • written 5.0 years ago by Mozart ▴ 30

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1.2k

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svaseq sva

6.1 years ago flippy23 • 0

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1.1k

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MEDIPS svaseq sva

updated 6.2 years ago by Lukas Chavez ▴ 570 • written 6.2 years ago by tofukaj • 0

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2.1k

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deseq2 svaseq

6.2 years ago bioinfo • 0

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1.9k

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edger sva svaseq limma

updated 6.9 years ago by Ryan C. Thompson ★ 7.9k • written 6.9 years ago by cats_dogs ▴ 20

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3.9k

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DESeq2 sva svaseq batch effect correction

7.2 years ago L_K • 0

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1.3k

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svaseq batcheffectcorrection

7.4 years ago burcu.atasu • 0

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1.8k

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ruvseq svaseq edaseq

updated 7.4 years ago by davide risso ▴ 980 • written 7.4 years ago by llo ▴ 10

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1.5k

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sva svaseq batch effect batch effects batch effect correction

7.7 years ago vedran.franke • 0

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2.0k

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deseq2 svaseq

updated 7.7 years ago by Michael Love 43k • written 7.7 years ago by gpalidwor ▴ 10

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2.1k

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sva svaseq

updated 7.8 years ago by Guido Hooiveld ★ 4.1k • written 7.8 years ago by wamiqsaifi • 0

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2.8k

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limma sva svaseq

updated 8.1 years ago by Aaron Lun ★ 28k • written 8.1 years ago by Bogdan ▴ 670

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2.1k

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svaseq dexseq

updated 8.2 years ago by Alejandro Reyes ★ 1.9k • written 8.2 years ago by tofukaj • 0

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3.0k

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svaseq combat sva RANseq batcheffect removebatcheffect

updated 8.5 years ago by Jakub ▴ 50 • written 8.5 years ago by amoltej ▴ 10

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6.1k

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deseq2 svaseq

8.5 years ago Akula, Nirmala NIH/NIMH [C] ▴ 190

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2.2k

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deseq2 sva svaseq

updated 8.6 years ago by Michael Love 43k • written 8.6 years ago by szenitha ▴ 20

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2.9k

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sva svaseq batcheffectcorrection

updated 8.7 years ago by Jeff Leek ▴ 650 • written 8.7 years ago by szenitha ▴ 20

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4.2k

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deseq2 sva svaseq pca

8.8 years ago Peter Alto ▴ 20

22 results • Page 1 of 1

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Answer: Version conflict when pushing to scQTLtools devel branch by shepherl 4.1k

There is a Bioconductor release today. There were notifications on the bioc-devel mailing list https://stat.ethz.ch/pipermail/bioc-devel…

Comment: DiffBind can't find a DAR by Mengjun • 0

The details about this question: I have 4 samples with 2 conditions( ctrl_1, ctrl_2, ko_1, ko_2), i use these 4 samples as input. Here is …

Comment: DiffBind can't find a DAR by Mengjun • 0

Thank you very much for pointing out this shortcoming. I will improve it.

Comment: samtools loading in R by Charlie • 0

This is obviously a very late answer but I had a similar error: > sh: samtools: command not found > > sh: samtools: command not found > …

Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by njmcdirect • 0

https://www.www-njmcdirect.run/

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Comment: GSVA ssGSEA vs. Broad implementation of ssGSEA

Answer: GSVA ssGSEA vs. Broad implementation of ssGSEA

GSVA ssGSEA vs. Broad implementation of ssGSEA

Comment: biomaRt server error, and mirrors do not help

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