Bioconductor RUV

Showing : RUV • reset

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703

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SpikeIn RUVSeq DESeq2 RUV

updated 9 months ago by Michael Love 43k • written 9 months ago by Ειρήνη • 0

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2.0k

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RUV4 RUV Microarray

4.0 years ago • updated 3.9 years ago Antonio • 0

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2.1k

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RUVSeq RUV RNA-seq

updated 4.6 years ago by James W. MacDonald 68k • written 4.6 years ago by karissa.barthelson ▴ 20

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2.1k

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RUV Nanostring RUV-III

updated 5.0 years ago by hermidalc ▴ 20 • written 5.7 years ago by raf4 ▴ 30

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1.4k

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deseq2 RUV batch highly variable genes

updated 5.1 years ago by tmms • 0 • written 5.1 years ago by f_pardow • 0

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1.5k

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deseq2 ruv batch

updated 5.5 years ago by Michael Love 43k • written 5.5 years ago by r.tom • 0

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1.2k

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missmethyl epic illuminahumanmethylationepicanno.ilm10b4.hg19. ruv

6.6 years ago peter.fransquet • 0

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1.2k

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methylation missmethyl RUV batch effect

6.9 years ago RC • 0

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1.2k

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missmethyl RUV control probes

6.9 years ago Taub, Margaret ▴ 10

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3.1k

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ruv ruvseq ruvnormalize single-cell zero-inflated

updated 7.7 years ago by davide risso ▴ 980 • written 7.7 years ago by Nik Tuzov ▴ 90

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2.9k

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RUV ruvseq ruvr ruvnormalize single cell

7.7 years ago Nik Tuzov ▴ 90

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1.1k

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rnaseq ruv differential gene expression R

7.8 years ago manish20072013 • 0

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3.6k

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RUV single cell batch effect

8.0 years ago ribioinfo ▴ 100

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1.2k

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ruv

8.1 years ago sasha • 0

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2.7k

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ruvseq ruvg ruv

updated 8.2 years ago by davide risso ▴ 980 • written 8.3 years ago by weiwsmiling • 0

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1.3k

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methylation gene expression sva batch effect ruv

8.3 years ago carleshf ▴ 10

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1.9k

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ruvseq RUV ruvnormalize ruvg

8.8 years ago anthonycolombo60 • 0

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2.7k

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ruvseq ruv microrna

9.7 years ago sergio.espeso-gil • 0

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1.9k

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ruv microarray

updated 9.7 years ago by gthm ▴ 30 • written 9.9 years ago by Pauly Lin ▴ 160

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3.0k

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ruvseq ruv

updated 9.9 years ago by davide risso ▴ 980 • written 9.9 years ago by Pauly Lin ▴ 160

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3.3k

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RUV ruvseq rnaseq

9.9 years ago sergio.espeso-gil • 0

21 results • Page 1 of 1

Recent ...

Replies

Answer: WGCNA by ATpoint ★ 4.8k

> I would like to ask whether it would make sense to first normalize the count data using DESeq2 and VST before performing WGCNA. This …

Answer: cannot download atena annotation for human by Robert Castelo ★ 3.4k

Hi, sorry for the delay in getting back to you, probably by now you found the solution yourself, but just in case you didn't or anybody els…

Answer: Comparison of results obtained from a subset of the data versus the complete dat by swbarnes2 ★ 1.4k

In general, using the entire dataset and then just comparing the subgroups you want within the whole dataset is preferable.

Comment: Differential expression analysis using two TCGA datasets by ATpoint ★ 4.8k

If these are two different batches then they're fully confounded making it statistically invalid. Biologically, I find it at least question…

Answer: PhD scholar by ATpoint ★ 4.8k

Hi, please consider asking this at biostars.org as here we're mainly answering precise technical questions towards the packages. You are se…

Votes

Answer: Origin of the labels for the SingleCellMultiModal dataset

Answer: PhD scholar

Answer: how to use `arrayWeightsQuick()`?

Having Trouble Using CNE12() and CNE21() in CNEr

Awards • All

Scholar to ATpoint ★ 4.8k