Bioconductor RUV

Showing : RUV • reset

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418

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SpikeIn RUVSeq DESeq2 RUV

updated 3 months ago by Michael Love 42k • written 4 months ago by Ειρήνη • 0

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1.7k

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RUV4 RUV Microarray

3.5 years ago Antonio • 0

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1.9k

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RUVSeq RUV RNA-seq

updated 4.1 years ago by James W. MacDonald 67k • written 4.1 years ago by karissa.barthelson ▴ 20

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1.9k

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RUV Nanostring RUV-III

updated 4.5 years ago by hermidalc ▴ 20 • written 5.2 years ago by raf4 ▴ 30

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1.2k

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deseq2 RUV batch highly variable genes

updated 4.7 years ago by tmms • 0 • written 4.7 years ago by f_pardow • 0

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1.4k

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deseq2 ruv batch

updated 5.1 years ago by Michael Love 42k • written 5.1 years ago by r.tom • 0

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1.1k

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missmethyl epic illuminahumanmethylationepicanno.ilm10b4.hg19. ruv

6.2 years ago peter.fransquet • 0

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1.1k

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methylation missmethyl RUV batch effect

6.5 years ago RC • 0

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1.1k

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missmethyl RUV control probes

6.5 years ago Taub, Margaret ▴ 10

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2.9k

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ruv ruvseq ruvnormalize single-cell zero-inflated

updated 7.2 years ago by davide risso ▴ 980 • written 7.2 years ago by Nik Tuzov ▴ 90

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2.6k

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RUV ruvseq ruvr ruvnormalize single cell

7.3 years ago Nik Tuzov ▴ 90

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1.0k

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rnaseq ruv differential gene expression R

7.4 years ago manish20072013 • 0

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3.4k

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RUV single cell batch effect

7.6 years ago ribioinfo ▴ 100

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1.1k

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ruv

7.7 years ago sasha • 0

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2.5k

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ruvseq ruvg ruv

updated 7.8 years ago by davide risso ▴ 980 • written 7.9 years ago by weiwsmiling • 0

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1.2k

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methylation gene expression sva batch effect ruv

7.9 years ago carleshf ▴ 10

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1.7k

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ruvseq RUV ruvnormalize ruvg

8.3 years ago anthonycolombo60 • 0

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2.5k

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ruvseq ruv microrna

9.3 years ago • updated 9.2 years ago sergio.espeso-gil • 0

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1.8k

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ruv microarray

updated 9.3 years ago by gthm ▴ 30 • written 9.5 years ago by Pauly Lin ▴ 160

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2.8k

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ruvseq ruv

updated 9.5 years ago by davide risso ▴ 980 • written 9.5 years ago by Pauly Lin ▴ 160

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2.9k

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RUV ruvseq rnaseq

9.5 years ago sergio.espeso-gil • 0

21 results • Page 1 of 1

Recent ...

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Comment: Consistent Decimals In Data After Antibody Array Background Correction Using Lim by Ai • 0

Hi Gordon, Thank you so much for answering my question and confirming that this is expected! I will go ahead note this down. Sincerely, …

Answer: Annotation for EPICv2 by icecreamlover • 0

Hello, I am also working on analyzing my data from EPICv2 using ChAMP. I used this resource as a guide: https://github.com/YuanTian1991/ChA…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

And it doesn't matter if you're doing gene set analyses after, if the statistics are questionable to begin with.

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

If you're saying that (as an example) you have treated and control in both assay types, and you want to combine and make comparisons betwee…

Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Guido Hooiveld ★ 4.1k

I have contacted NCBI, and meanwhile got an an answer. See below. It turns out that the official, HGNC-approved symbols are present in the…

Votes

Answer: Consistent Decimals In Data After Antibody Array Background Correction Using Lim

A: How does edgeR cpm function calculate log(CPM) values?

Answer: DecideTest vs topTAGs in edgeR

Comment: DESeq Input from Salmon + tximport/tximeta

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