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RNASeqPower
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RNASeq time course analysis, missing time points for control
RNASeqData
RnaSeqSampleSize
RNASeq
RNASeqPower
5 months ago
drewhaydensteele
• 0
0
votes
1
reply
418
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Comparing RNASeq data from multiple studies
RNASeqData
RnaSeqSampleSize
RNASeqPower
RNASeq
updated 7 months ago by
Basti
▴ 780 • written 7 months ago by
Luke
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1
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3
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824
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Is it okay to increase filtering to get more significant Adjusted P Values for DEGs found using Limma?
RNASeqPower
edgeR
DifferentialExpression
limma
RNASeq
updated 12 months ago by
Gordon Smyth
50k • written 12 months ago by
Sara
• 0
0
votes
0
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515
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Typo in citation for RNASeqPower
RNASeqPower
citation
23 months ago
stephenjjohnson
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0
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3
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1.8k
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How to calculate coefficient of variation within group?
edgeR
limma
RNASeqPower
updated 2.2 years ago by
Gordon Smyth
50k • written 3.2 years ago by
Ahdee
▴ 50
0
votes
5
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2.2k
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getting sample size for RNAseq experiment
rnaseqpower
sspa
sample size
sequencing
complex-design
updated 8.2 years ago by
m.van_iterson
▴ 20 • written 8.3 years ago by
roser.navarro
• 0
0
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1
reply
1.2k
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Depth or # of reads for RNASeqPower
rnaseqpower
9.6 years ago
drnknmstrr
• 0
0
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0
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1.0k
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Power Calculation of multiple factors design of RNA-sequencing study
edgeR
DESeq
RNASeqPower
edgeR
DESeq
RNASeqPower
10.2 years ago
Guest User
★ 13k
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Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
by
BioinfGuru
▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
by
makala
• 0
Thanks a lot!
Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
by
Erik Wright
▴ 150
Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
by
Matthew Thornton
▴ 360
So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!
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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
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