Bioconductor P-Value

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746

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outputresult DEqMS sca.adj.pval error p-value

2.2 years ago Bastian • 0

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1.2k

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one-sided nbinomWaldTest p-value meta-analysis DESeq2

updated 3.3 years ago by Michael Love 43k • written 3.3 years ago by nash12 • 0

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4.8k

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gwas genesis p-value q-q-plot

updated 3.9 years ago by Anna • 0 • written 5.0 years ago by solanum • 0

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2.4k

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p-value FDR DEP

updated 3.5 years ago by António Miguel de Jesus Domingues ▴ 510 • written 4.0 years ago by Alexei Leliavski ▴ 60

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1.8k

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statistical significance p-value q-value FDR qvalue

4.9 years ago manozawa ▴ 10

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1.1k

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ihw p-value multiple hypothesis

updated 5.5 years ago by Wolfgang Huber ★ 13k • written 5.5 years ago by xiaotong.yao23 ▴ 10

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1.5k

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edgeR FDR p-value Benjamini-Hochberg Differential Analysis

updated 5.8 years ago by Aaron Lun ★ 28k • written 5.8 years ago by ilovesuperheroes1993 • 0

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2.0k

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deseq2 p-value continuous deseq

5.8 years ago ariel ▴ 20

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2.2k

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DESeq2 nbinomWaldTest one-sided p-value

updated 6.3 years ago by Michael Love 43k • written 6.3 years ago by t.kuilman ▴ 170

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1.2k

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weighted correlation network analysis WGCNA P-Value

6.3 years ago modarzi ▴ 10

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12k

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FDR p-value DESeq RNA-Seq

updated 7.0 years ago by Wade Davis ▴ 60 • written 7.6 years ago by yjiangnan ▴ 10

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1.1k

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Gostats p-value

7.4 years ago salamandra ▴ 20

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1.7k

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deseq2 normalization p-value metaseq

updated 7.4 years ago by Ryan C. Thompson ★ 7.9k • written 7.4 years ago by ed_isfahani • 0

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3.8k

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limma microarray fdr p-value results

updated 7.5 years ago by Aaron Lun ★ 28k • written 7.5 years ago by bhgyu ▴ 30

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2.3k

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diffbind p-value differential binding analysis fold enrichment values using diffbind

updated 8.5 years ago by Rory Stark ★ 5.2k • written 8.5 years ago by alisonhanh.nguyen • 0

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14k

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deseq differential gene expression statistics p-value

updated 3.8 years ago by Kai_Qi ▴ 20 • written 8.8 years ago by Giard ▴ 30

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4.8k

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p-value detection

updated 8.9 years ago by Gordon Smyth 52k • written 8.9 years ago by Eleni Christodoulou ▴ 150

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2.6k

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rankprod p-value

updated 9.5 years ago by James W. MacDonald 67k • written 9.5 years ago by brilladine • 0

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2.4k

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p-value medips MACS

updated 9.5 years ago by Lukas Chavez ▴ 570 • written 9.5 years ago by tptacek3050 • 0

19 results • Page 1 of 1

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Answer: Feature Counts - potential bug with outfile.jcounts by Gordon Smyth 52k

The behavior you have documented in not surprising and is explained in the featureCounts documentation. The first thing to understand is t…

Answer: Feature Counts -R XS Read Assignment Tag by Gordon Smyth 52k

I am not very familiar with this part of the featureCounts code, but I do not think it would be at all practical or desirable for featureCo…

Comment: Margins for gene_set_enrichment_plot by Leonardo Collado Torres ★ 1.1k

Thanks! This one might be worth remaking with `ComplexHeatmap`. Similar to https://github.com/LieberInstitute/spatialLIBD/pull/91 that was …

Comment: DESeq2 - Comparing Comparisons by James W. MacDonald 67k

Full disclosure: I don't use `DESeq2`, and find the contrasts specification confusing. Because of that, I generally recommend using `result…

Comment: DESeq2 - Comparing Comparisons by sk • 0

Hi James, Thank you for your response! Quick follow-up; if I structure my contrast as below, will it perform (A-B) - (C-D)? res_diff <…

Votes

Answer: Mapping Between GenBank ID's and Uniprot

Comment: What type of counts data to import for performing Isoform analysis in edgeR

A: Relations used in GO.db GOBPANCESTOR

Relations used in GO.db GOBPANCESTOR

Answer: RSubread output significantly different from bash Subread output

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