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Noiseq
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Inquiring about Comparative Analysis without Replicates in NOIseq R Package
NOISeq
withoutreplicate
Noiseq
updated 14 months ago by
ATpoint
★ 4.5k • written 14 months ago by
Rutuja
• 0
1
vote
1
reply
891
views
NOIseq Probability column
RNAseq
RNASeqData
NOISeq
2.3 years ago
Pratibha
▴ 10
0
votes
2
replies
1.0k
views
Differential expression on RNAseq without replicates
DESeq2
NOISeq
edgeR
updated 3.8 years ago by
ATpoint
★ 4.5k • written 3.8 years ago by
Themis
• 0
3
votes
6
replies
2.0k
views
deseq2 + filtering low counts with noiseq function
deseq2
noiseq
lowcounts
rnaseq
updated 2.7 years ago by
Michael Love
42k • written 4.1 years ago by
andreia
▴ 10
0
votes
1
reply
885
views
How to arrange multiple plots into one page in NOISeq?
noiseq
RNA-seq
quality control
updated 4 months ago by
baptiste.bidon
• 0 • written 5.1 years ago by
Arindam
▴ 80
0
votes
0
replies
768
views
NOISeq 'readData' not writing correctly
software error
NOISeq
5.3 years ago
jledmondson
• 0
0
votes
1
reply
975
views
Is possible to use NOISeq with counts from RSubread?
noiseq
rsubread
tophat
bowtie
bowtie2
5.3 years ago
Marcelo Laia
▴ 450
0
votes
0
replies
1.1k
views
Noiseqbio function (NOISEQ package)
noiseq
logfoldchange
6.5 years ago
Aurora
▴ 20
0
votes
0
replies
1.1k
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
6.7 years ago
aokoro
• 0
0
votes
0
replies
1.7k
views
Problem with heatmap by ComplexHeatmap
complexheatmap
Rstudio
NOISeq
7.1 years ago
Luiz
• 0
0
votes
3
replies
1.6k
views
Is the CPM filtering method from NOISeq unsupervised?
rnaseq
de analysis
gene filtering
noiseq
updated 7.2 years ago by
James W. MacDonald
67k • written 7.2 years ago by
Mau
▴ 50
0
votes
5
replies
4.0k
views
GC content and length bias correction with DESeq2 using cqn normalization factor matrix
deseq2
cqn
noiseq
updated 7.4 years ago by
Michael Love
42k • written 7.4 years ago by
glmazzo
▴ 10
0
votes
0
replies
1.3k
views
NOISeq error message while using ARSyNseq batch correction function
noiseq
batch effect
ARSyNseq
8.9 years ago
lina.faller
▴ 10
0
votes
0
replies
1.1k
views
Question: type of NOISeq package input file
RNASeq
NOISeq
RNASeq
NOISeq
11.6 years ago
Guest User
★ 13k
0
votes
2
replies
2.9k
views
NOISeq initialization problem
NOISeq
NOISeq
updated 12.0 years ago by
Dan Tenenbaum
★ 8.2k • written 12.0 years ago by
Guest User
★ 13k
0
votes
4
replies
2.2k
views
NOISeq installation error
NOISeq
NOISeq
updated 12.0 years ago by
Sean Davis
21k • written 12.0 years ago by
Fatemehsadat Seyednasrollah
▴ 260
0
votes
0
replies
1.2k
views
NOISeq-real input parameters
NOISeq
NOISeq
12.6 years ago
Guest User
★ 13k
17 results • Page
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Replies
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 20
Hi Maria, so what is the code you are using? By the 3rd way to conduct the analysis do you mean looking at the interaction model from part …
Comment: miRTarRnaseq library
by
María Calvo
• 0
Hello, in line with the previous questions, when the miRNA-mRNA interaction analysis is performed (3 rd way to conduct the analysis), I obt…
Answer: heatmap with batch effect
by
James W. MacDonald
67k
You have only one condition in the second batch, so it's not possible to remove the batch effect. You can probably adjust for it somewhat, …
Answer: how do I convert an Ilumn IDREF to a CPG loci
by
James W. MacDonald
67k
``` > library(IlluminaHumanMethylationEPICanno.ilm10b4.hg19) > Locations DataFrame with 865859 rows and 3 columns ch…
Answer: Which input data is acceptable for MAST?
by
Andrew_McDavid
▴ 270
Not too familiar with SCT v2. If it also has a point-mass at zero and the non-zero component is roughly-symmetric, then it might work ok w…
Votes
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Comment: Convert HGVS Representation back to Reference Genome Coordinates
Answer: How to control batch effect if Group and batch are same?
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