Bioconductor NanoStringDiff

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1.8k

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NanoStringDiff clusterProfiler fgsea

22 months ago pg45863 ▴ 10

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1.5k

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DESeq2 NanoStringDiff limma

22 months ago pg45863 ▴ 10

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935

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GEOquery MicroarrayData Normalization Microarray NanoStringDiff

updated 2.2 years ago by James W. MacDonald 68k • written 2.2 years ago by Aleksandra • 0

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728

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NanoStringDiff

updated 2.3 years ago by James W. MacDonald 68k • written 2.3 years ago by Paraskevi • 0

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787

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DifferentialExpression NanoStringDiff

3.3 years ago sanrie10 • 0

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limma edgeR DESeq2 NanoStringDiff

updated 3.6 years ago by James W. MacDonald 68k • written 3.6 years ago by reberya • 0

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1.3k

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Nan NanoStringDiff

3.8 years ago choijamts • 0

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2.4k

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NanoStringDiff NanoString nCounter DE analysis

updated 17 months ago by georgersmith • 0 • written 5.7 years ago by lim6432 ▴ 50

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866

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NanoStringDiff

4.0 years ago YM • 0

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1.2k

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Bioconductor Transcriptomics NanoStringDiff

updated 4.4 years ago by Laurent Gatto 1.6k • written 4.4 years ago by Pedro ▴ 10

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1.4k

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NanoStringDiff

5.2 years ago stephen.pollo • 0

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NanoStringDiff GLM Gene expression

updated 5.6 years ago by James W. MacDonald 68k • written 5.6 years ago by Guillaume Robert • 0

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NanoStringDiff

updated 14 months ago by pjanas • 0 • written 5.9 years ago by noelleenright ▴ 10

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nanostringdiff nanostring NanoStringDiff

updated 6.8 years ago by James W. MacDonald 68k • written 6.8 years ago by casey.rimland ▴ 170

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1.6k

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nanostring NanoStringDiff design and contrast matrix differential gene expression ncounter

7.7 years ago c.kohler • 0

15 results • Page 1 of 1

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Comment: DiffBind can't find a DAR by ATpoint ★ 4.8k

"My cake does not look as advertised in the recipe", with this sloppy sentence I hope you understand that you need to give people details, …

Comment: DESeq - help with pair wise comparisons by bd2000 ▴ 30

Follow up question, is this the correct way to extract results? ```r results <- results(ddsObj, list(c("GroupControl.Followup", "GroupTrea…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0

Thank you for your reply! I would love to know your thoughts on the plots I've included above. > 'Are the differences between groups lar…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0

I also realised that the other gene I pointed out that was flagged as DE but had similar count differences also shows that rep1 is lower th…

Comment: DESeq - help with pair wise comparisons by bd2000 ▴ 30

Thanks that's great!! I've followed the instructions from the link you sent, is my code correct? By correct I mean, is my code comparing fo…

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Comment: DESeq - help with pair wise comparisons

Answer: Is random access by row index possible for an indexed VCF file?

Answer: SingleR with multiple single cell references

Awards • All

Scholar to Aaron Lun ★ 28k

Scholar to James W. MacDonald 68k