Bioconductor MultipleComparison

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515

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limmaGUI lim MultipleComparison multip

updated 13 months ago by Gordon Smyth 52k • written 13 months ago by roger.moreno.justicia • 0

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964

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Linnorm DEG MultipleComparison

updated 18 months ago by shunyip • 0 • written 3.7 years ago by awakumaya • 0

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1.2k

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Proteomics proDA MultipleComparison

19 months ago t.b.n.nguyen-9 • 0

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1.3k

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MultipleComparison DESeq2 Genetics contrasts RNASeq

updated 21 months ago by James W. MacDonald 68k • written 21 months ago by a26fd14e • 0

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967

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DESeq2 MultipleComparison r

updated 2.3 years ago by Michael Love 43k • written 2.3 years ago by ncorak • 0

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728

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MultipleComparison DESeq2

updated 2.9 years ago by Michael Love 43k • written 2.9 years ago by Joshua • 0

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2.9k

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MultipleComparison edgeR DESeq2

written 3.0 years ago by yuet • 0

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999

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factor DESeq2 MultipleComparison

updated 3.4 years ago by swbarnes2 ★ 1.4k • written 3.4 years ago by diegocastano182 • 0

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1.3k

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GeneExpression R limma MultipleComparison

updated 4.4 years ago by James W. MacDonald 68k • written 4.4 years ago by Gwénolé • 0

9 results • Page 1 of 1

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Comment: Differential expression analysis using two TCGA datasets by ATpoint ★ 4.8k

If these are two different batches then they're fully confounded making it statistically invalid. Biologically, I find it at least question…

Comment: PhD scholar by ATpoint ★ 4.8k

Hi, please consider asking this at biostars.org as here we're mainly answering precise technical questions towards the packages. You are se…

Answer: how to use `arrayWeightsQuick()`? by Gordon Smyth 52k

Yes, that is the correct way to use `arrayWeightsQuick`. Thanks for pointing out that there is still a reference to `arrayWeightsSimple` i…

Answer: fast apply on RleList by story.benjamin ▴ 20

solved with viewApply (code is simplified below) + map reduce on chrs test.split <- split(test.gr,seqnames(test.gr)) final.st…

Comment: fast apply on RleList by story.benjamin ▴ 20

Hi James, thanks for the reply. I ultimately figured it out ... viewApply showed a massive speed increase for me (see other answer) - I was…

Votes

Having Trouble Using CNE12() and CNE21() in CNEr

Answer: Having Trouble Using CNE12() and CNE21() in CNEr

annotation EpicV2

Answer: fast apply on RleList

Answer: BiocParallel_1.40.1.tar.gz not available

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Popular Question to Ariel Chernomoretz ▴ 170