Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Mfuzz
•
reset
3
votes
6
replies
1.5k
views
Average biological replicates in RNA-seq
Mfuzz
RNASeq
14 months ago
boczniak767
▴ 740
0
votes
0
replies
617
views
Mfuzz package loading issues
Mfuzz
MacBook
loadingissues
18 months ago
Jon
• 0
0
votes
4
replies
1.3k
views
Mfuzz package loading issues
Mfuzz
loadingissues
macbook
18 months ago
Jon
• 0
0
votes
2
replies
1.1k
views
R: problem with running time-series analysis software: Mfuzz
time-series
mfuzz
replace=FALSE
2.9 years ago
soda
▴ 80
1
vote
1
reply
804
views
Fuzzy C means clustering
Mfuzz
updated 4.4 years ago by
James W. MacDonald
68k • written 4.4 years ago by
syed.imtiazaziz
• 0
0
votes
0
replies
872
views
Mfuzz time-series design
mfuzz
normalization
5.8 years ago
xizhang
• 0
3
votes
9
replies
3.2k
views
DESeq2 Normalized Counts for Mfuzz
deseq2
rnaseq
mfuzz
updated 6.8 years ago by
Michael Love
43k • written 6.8 years ago by
rbenel
▴ 40
0
votes
0
replies
1.2k
views
PROBLEM WITH MFUZZ
mfuzz
fold change
log2
STANDARDISATION
6.8 years ago
prakashpandey1111
• 0
0
votes
0
replies
836
views
For optimal c and m using fuzzy c-means clustering
mfuzz
6.9 years ago
prakashpandey1111
• 0
1
vote
1
reply
1.6k
views
expression profiles between DESeq2 and Mfuzz
deseq2
mfuzz
differential expression
timecourse
updated 8.6 years ago by
Michael Love
43k • written 8.6 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
2
replies
2.4k
views
cluster composition in Mfuzz package
cluster
mfuzz
gene names
updated 9.1 years ago by
Assa Yeroslaviz
★ 1.5k • written 9.1 years ago by
thomas.dobrenel
• 0
1
vote
1
reply
5.8k
views
Mfuzz: fill.NA - Warning messages: argument is not numeric or logical: returning NA
mfuzz
clustering
bioinformatics
proteomics
timecourse
updated 9.2 years ago by
Laurent Gatto
1.6k • written 9.2 years ago by
under-waterworld
• 0
0
votes
0
replies
1.3k
views
Small bug in mfuzz.plot
Mfuzz
9.2 years ago
musically.ut
• 0
0
votes
0
replies
1.7k
views
mfuzz problems
Clustering
Mfuzz
Clustering
Mfuzz
11.0 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
0
replies
1.3k
views
[Mfuzz] y-axis values
Clustering
Mfuzz
Clustering
Mfuzz
14.1 years ago
boczniak767
▴ 740
0
votes
3
replies
4.6k
views
[Mfuzz] Error in cmeans(exprs(eset)
Mfuzz
Mfuzz
updated 11 months ago by
Caio
• 0 • written 14.1 years ago by
boczniak767
▴ 740
0
votes
1
reply
1.8k
views
Mfuzz plot -pdf
Mfuzz
Mfuzz
updated 16.0 years ago by
James W. MacDonald
68k • written 16.0 years ago by
dorothyc
▴ 140
0
votes
1
reply
1.7k
views
Mfuzz package
Clustering
Mfuzz
Clustering
Mfuzz
updated 16.1 years ago by
James W. MacDonald
68k • written 16.1 years ago by
dorothyc
▴ 140
0
votes
4
replies
6.7k
views
Heatmap without using clustering result
Clustering
Mfuzz
Clustering
Mfuzz
updated 16.2 years ago by
Steve Pederson
▴ 60 • written 16.2 years ago by
gregory voisin
▴ 430
19 results • Page
1 of 1
Recent ...
Replies
Comment: GSEA preranked analysis downstream of DEseq2
by
Ajay
• 0
`logFC * -log10(pval)` seems to be the pi-score proposed in this [paper][1] [1]: https://pmc.ncbi.nlm.nih.gov/articles/PMC3957066/
Comment: error in ChAMP loading file
by
janwilseo
• 0
Any update on this post? I also had an issue with this. [erosion control](https://charlestonhydroseeding.com/)
Answer: CluserProfiler message "No gene can be mapped"
by
James W. MacDonald
68k
Two things. First, the order of your term2gene is backwards (should be term and then gene, like the name), and by default `enricher` adjust…
Comment: Controlling for batch and estrus cycle using DESeq2 in RNA-seq analysis
by
donnycrimson
• 0
One potential workaround might be to adjust for these factors using a combination of design matrices perhaps including batch as a covariate…
Comment: DESeq2 Design controlling for gender
by
donnycrimson
• 0
On a lighter note, while you are tackling such complex data, you might enjoy a quick break playing the [Slope Game](https://slopegame.lol)…
Votes
DiffBind; Error: No sites have activity greater than filter value
remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
How to remove X & Y chromosome genes from RNAseq data
Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?
A: Unbalanced experiment with multiple samples from each patient.
Awards
• All
Popular Question
to
Dario Strbenac
★ 1.6k
Popular Question
to
etiennedanis
• 0
Popular Question
to
javier.ruizramirez
• 0
Autobiographer
to
Paul Harrison
▴ 100
Popular Question
to
mohammedtoufiq91
▴ 10
Locations
• All
WEHI, Melbourne, Australia,
1 minute ago
The city by the bay,
30 minutes ago
UPF, Barcelona, Spain,
3 hours ago
India,
4 hours ago
EMBL Heidelberg,
5 hours ago
Traffic: 516 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6