Bioconductor Mac

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RStudio R M1 BiocParallel Mac

updated 2.1 years ago by Christian Mertes • 0 • written 2.3 years ago by me.achleitner • 0

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biomaRt mac

updated 18 months ago by 15753563659 ▴ 60 • written 2.3 years ago by alfonsosaera • 0

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error mac DESeq2 GenomeInfoDb R

4.1 years ago • updated 4.0 years ago Dan ▴ 20

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software error WGCNA mac

updated 4.8 years ago by James W. MacDonald 68k • written 4.8 years ago by 562125035 • 0

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BiocManager Mac

updated 5.6 years ago by Martin Morgan 25k • written 5.6 years ago by raf4 ▴ 30

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BiocParallel mac R

updated 5.9 years ago by Martin Morgan 25k • written 5.9 years ago by geo.vogler ▴ 10

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msgfplus mac java

updated 6.6 years ago by Mike Smith ★ 6.6k • written 6.6 years ago by dgemoets • 0

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gwascat ggbio Mac

8.6 years ago jameshunterbr • 0

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rhdf5 r mac

9.5 years ago ambageo • 0

9 results • Page 1 of 1

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Answer: SingleR with multiple single cell references by Aaron Lun ★ 28k

> Is it necessary to piece together the individual steps manually (e.g. aggregateReference, trainSingleR, classifySingleR, combineRecompute…

Answer: Automatically install dependencies by ATpoint ★ 4.7k

The BiocManager, which is sort of an extended wrapper around `install.packages`, installs all R dependencies. If you see errors then this i…

Answer: To count or not to count multi-overlapping reads? by Gordon Smyth 52k

> How does it handle reads that map to a gene that is located in a region that also has another gene but on the alternate strand? Overlapp…

Comment: Weird p-values using DESeq2? by ATpoint ★ 4.7k

This does not look like normalized counts but raw counts. Consider using `counts(dds, normalized = TRUE)` or the output of `normTransform()…

Answer: Weird p-values using DESeq2? by Wolfgang Huber ★ 13k

Dear Ingrid, thank you for asking. Can you provide the input count matrix (you can "pseudonymize" the biological conditions and the gene n…

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A: Fraction count for multi mapping reads; how to generate input file for Deseq2 fo

Comment: Weird p-values using DESeq2?

Comment: Overcoming confounding in batch effect correction

Answer: Store Matrix in DataFrame Cell

Answer: enrichGOgradient color change

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Popular Question to maltethodberg ▴ 180