updated 10 months ago by
James W. MacDonald
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written 10 months ago by
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Comment: input for singR function
by
iamin053
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0
Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!
Comment: build samplesheet and plot profile
by
yf
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![enter image description here][1]
[1]: /media/images/8ea93bd0-bc90-443d-a332-4701f54a
Answer: I am having issues with bowtie2_build
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James W. MacDonald
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Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…
Answer: DEG analysis across multiple timepoints, treatments and tissues
by
Michael Love
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Yes, if you think the entire time course can be modified by tissue effects then you would include another set of interaction terms.
I re…
Comment: How to visualize these pathways using pathview
by
Guido Hooiveld
★
4.1k
FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…
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