Showing : Install • reset
0
votes
2
replies
322
views
Cannot install GO.db and org.Hs.eg.db
Install
updated 8 days ago by 67k • written 9 days ago by • 0
1
vote
3
replies
657
views
chemmineOB install help
ChemmineOB Install
6 months ago jrbald04 • 0
1
vote
9
replies
1.1k
views
Cannot install oligo on Fedora
oligo source Install
7 months ago • updated 6 months ago Guido Hooiveld ★ 4.1k
5
votes
6
replies
2.5k
views
Not able to install any Bioconductor 3.18 package [unable to access index]
Install
updated 7 months ago by ▴ 140 • written 7 months ago by ▴ 140
2
votes
2
replies
504
views
unable to access bioconductor packages - qvalue installation failed...
Install
updated 7 months ago by 4.1k • written 7 months ago by ▴ 10
2
votes
4
replies
842
views
Help with infinite recursion - non-zero exit status in installation of GenomeInfoDbData
Install GenomeInfoDbData GenomeInfoDb
updated 7 months ago by 67k • written 7 months ago by ▴ 20
1
vote
0
replies
3.5k
views
Tutorial: Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
bioconductor Install
8 months ago BioinfGuru ▴ 70
0
votes
2
replies
1.3k
views
error in install immunedeconv
Install
updated 8 months ago by • 0 • written 21 months ago by • 0
0
votes
4
replies
787
views
DNABarcodes-Installation Issue
DNABarcodes Install
10 months ago nk130 • 0
0
votes
6
replies
2.9k
views
Error when Installing BioConductor Package ('affy')
Bioconductor Install affy
updated 13 months ago by ★ 4.6k • written 2.1 years ago by • 0
0
votes
0
replies
1.0k
views
Version map cannot be validated - not mapping to new bioconductor website
Install
13 months ago Alexander • 0
2
votes
5
replies
1.7k
views
SparseArray unable to install on Bioc 3.18
DESeq2 SummarizedExperiment SparseArray Install DelayedArray
updated 13 months ago by 43k • written 13 months ago by • 0
0
votes
7
replies
2.7k
views
Unable to install RefPlus - R=4.3.1, BiocManager=3.18
Install instal
updated 13 months ago by 67k • written 13 months ago by • 0
0
votes
1
reply
1.0k
views
bioconductor - rhdf5 is not avbauloable for bioconductor version "3.14"
Bioconductor Install
updated 17 months ago by ★ 6.6k • written 17 months ago by • 0
3
votes
5
replies
1.7k
views
why is downloading the .tar.gz file for a given bioconductor package, then installing with R CMD INSTALL so much more effective than BiocManager::ins…
Bioconductor Install library biocmanager
updated 17 months ago by 6.7k • written 17 months ago by ▴ 20
0
votes
2
replies
804
views
msa Installation failed - please help
Install msa
19 months ago Ido • 0
1
vote
4
replies
7.0k
views
Error loading impute(): '/usr/lib/libgfortran.5.dylib' (no such file)
Install impute
updated 20 months ago by • 0 • written 2.9 years ago by • 0
0
votes
1
reply
4.7k
views
package ‘Bioconductor’ is not available for Bioconductor version '3.16'
Bioconductor Install
updated 20 months ago by ★ 4.6k • written 20 months ago by • 0
1
vote
2
replies
1.2k
views
Query regarding error in installation of "microbiomeutilities" R package
MicrobiomeData R microbiomeutilities Install
22 months ago abhisek001 • 0
1
vote
1
reply
2.8k
views
packages not installing from sources the package which needs compilation
Install
updated 2.0 years ago by 67k • written 2.0 years ago by • 0
2
votes
4
replies
2.9k
views
question regarding installation of "enrichplot" with BiocManager
R BiocManager install clusterProfiler GO
written 2.1 years ago by • 0
1
vote
7
replies
1.8k
views
query regarding error in installation of "goseq" R bioconductor package
R Bioconductor Install
updated 2.1 years ago by 4.1k • written 2.1 years ago by • 0
1
vote
3
replies
6.5k
views
Not able to install packages in Bioconductor version '3.16'
Install BiocManager version3.16
updated 23 months ago by 4.1k • written 2.1 years ago by • 0
5
votes
18
replies
8.5k
views
Install DESeq2 problem for macbook pro M1 Max
Bioconductor Install DESeq2
updated 12 months ago by • 0 • written 2.9 years ago by • 0
0
votes
2
replies
2.0k
views
Cannot install bioconductor DESeq2 package on M1 mac ... any advice?
DESeq2 Install r
updated 2.2 years ago by ★ 4.6k • written 2.2 years ago by • 0
1
vote
20
replies
4.9k
views
Deseq2 installed, but there is no package called ‘Biostrings’
DESeq2 Install
updated 2.2 years ago by 67k • written 2.2 years ago by • 0
1
vote
3
replies
1.4k
views
I can't upgrade to version 3.15 in R
Install
updated 2.2 years ago by 52k • written 2.2 years ago by • 0
1
vote
1
reply
791
views
Downloading DESeq package manually
DESeq2 Install
updated 2.2 years ago by ▴ 780 • written 2.2 years ago by • 0
1
vote
1
reply
1.1k
views
Unable to install "scruff" with BiocManager::install()
scruff Install ShortRead
updated 2.3 years ago by 4.1k • written 2.3 years ago by • 0
0
votes
1
reply
1.3k
views
Unable to install GenVisR under most recent R / Bioconductor version; waterfall option mainDropMut is not working
Install mainDropMut GenVisR
updated 2.5 years ago by 16k • written 2.6 years ago by • 0
2
votes
2
replies
1.3k
views
rtracklayer S.h
install
2.6 years ago gibran • 0
0
votes
1
reply
1.4k
views
trouble installing DESeq2
install packages R DESeq2
updated 2.6 years ago by 4.1k • written 2.6 years ago by • 0
0
votes
2
replies
3.1k
views
non-zero exit status when trying to install a package
Install
2.6 years ago BioC123 • 0
1
vote
3
replies
1.8k
views
Bioconductor installation error
Install
updated 2.7 years ago by • 0 • written 2.7 years ago by ▴ 10
0
votes
2
replies
1.8k
views
Installation problems
Install
updated 2.7 years ago by 4.1k • written 2.7 years ago by • 0
0
votes
2
replies
1.2k
views
Forking a package/install from source
install package fork bugfix
updated 2.7 years ago by 67k • written 2.7 years ago by • 0
0
votes
2
replies
2.2k
views
AnnotationHub installation ‘Rcpp’ 1.0.6 is already loaded, but >= 1.0.7 is required
AnnotationHub Install
updated 2.8 years ago by 4.1k • written 2.8 years ago by ▴ 70
2
votes
1
reply
4.5k
views
Bioconductor Package Installation
install TxDb.Hsapiens.UCSC.hg38.knownGene
2.8 years ago Theresa ▴ 20
1
vote
2
replies
1.1k
views
How to install R package from GitHub
Install github
updated 2.8 years ago by 4.1k • written 2.8 years ago by • 0
0
votes
3
replies
1.6k
views
Warning messages during intallation of XCMS
xcms Install
updated 2.8 years ago by 67k • written 2.8 years ago by • 0
0
votes
3
replies
2.3k
views
gpart installation fails: gpart_cpp.cpp:622:42: error: ‘PI’ was not declared in this scope
install gpart renv
updated 2.8 years ago by • 0 • written 2.9 years ago by • 0
3
votes
5
replies
12k
views
installing synapter package: package is not available for Bioconductor version '3.14'
synapter Install
2.8 years ago czan ▴ 10
4
votes
2
replies
5.2k
views
Install package without updating dependent package
Install AnnotationForge
3.0 years ago 亮 • 0
5
votes
4
replies
3.8k
views
XVector installation fails because zlib.h is not found
XVector docker Install
3.1 years ago RobKo ▴ 10
0
votes
3
replies
2.0k
views
Bioconductor 3.13 installer reports that affyQCReport is not available
Install 3.13 affyQCReport
updated 3.1 years ago by ▴ 10 • written 3.2 years ago by • 0
0
votes
2
replies
1.7k
views
Installing DESEq2 Error: unable to access index for repository https://bioconductor.org
Install Bioconductor DESeq2
3.2 years ago ladypurrsia ▴ 10
2
votes
4
replies
3.6k
views
BiocManager::install() does not work anymore
Install PackageType
updated 3.2 years ago by 4.1k • written 3.2 years ago by • 0
0
votes
1
reply
1.4k
views
install GenomicFeatures fail
GenomicFeatures install
updated 3.3 years ago by 67k • written 3.3 years ago by ▴ 80
0
votes
5
replies
1.7k
views
installation error: Error in setIs(class2, cli, extensionObject = obji, doComplete = FALSE and setClass() for chromVAR and VariantAnnotation
Install VariantAnnotation Bioconductor chromVAR
updated 3.3 years ago by 6.7k • written 3.3 years ago by • 0
1
vote
1
reply
1.2k
views
simplifyEnrichment install error
package Rversion Install simplifyEnrichment
updated 3.7 years ago by 4.1k • written 3.7 years ago by ▴ 10
50 results • Page 1 of 1
Recent ...
Replies
Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k
limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by xiaofeiwang198266 • 0
Thanks for your reply!
Votes
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
A: Expected counts from RSEM in DESeq2
A: Using RSEM reads for DESeq2
Awards • All
Popular Question to Ali Barry ▴ 40
Popular Question to gabriel.hoffman ▴ 170
Popular Question to Jenny Drnevich ★ 2.0k
Popular Question to martin.grigorov ▴ 10
Scholar to James W. MacDonald 67k
Locations • All
WEHI, Melbourne, Australia, 34 minutes ago
30 N Gould St STE 39034 Sheridan, WY, 35 minutes ago
Pakistan, 1 hour ago
Germany, 4 hours ago
Barcelona/Universitat Pompeu Fabra, 4 hours ago
Traffic: 486 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6