Bioconductor HTSeq

Showing : HTSeq • reset

votes

replies

999

views

DEXSeq HTSeq R

20 months ago • updated 19 months ago yr542 • 0

vote

replies

1.5k

views

DESeq2 microRNA HTSeq

2.3 years ago abhay.kanodia • 0

votes

1.1k

views

DESeq2 RNA-seq HTseq DESeqDataSetFromHTSeqCount

updated 2.4 years ago by Michael Love 43k • written 2.4 years ago by abhay.kanodia • 0

votes

replies

1.1k

views

DESeq2 htseq DEGseq RNASeq read

updated 2.4 years ago by Michael Love 43k • written 2.5 years ago by CP • 0

votes

replies

1.4k

views

software error HTSeq installation

updated 5.1 years ago by Martin Morgan 25k • written 5.1 years ago by eric33150 • 0

votes

replies

5.0k

views

voom htseq edgeR limma RNASeq123

updated 6.3 years ago by Gordon Smyth 52k • written 7.8 years ago by wd ▴ 30

votes

1.8k

views

DEXSeq dexseq_count htseq

8.1 years ago mat.lesche ▴ 110

vote

replies

2.3k

views

HTSeq HTSeqCounts Could not find function DEXSeq

updated 9.0 years ago by Martin Morgan 25k • written 9.0 years ago by sakura.nussbaum ▴ 10

8 results • Page 1 of 1

Recent ...

Replies

Answer: Custom CDF creation for HTA 2.0 array using GTF annotation by James W. MacDonald 68k

It doesn't appear that Manhong Dai is working at UM any longer, and the webpage appears to have fallen into disrepair (for example, the lin…

Comment: how to use `arrayWeightsQuick()`? by matthew • 0

In the specific use-case I have in mind, `expression` is a simple `matrix` of log2 gene expression per sample, no missing values.

Comment: BiocParallel_1.40.1.tar.gz not available by Johan • 0

It worked. Thanks :)

Comment: Model performance for spline modelling of RNA-seq timecourses in edgeR by skiaphrene ▴ 10

Dear Gordon, Thank you very much for your prompt reply. I agree with the limma/edgeR perspective of including all potentially explanatory…

Comment: how to use `arrayWeightsQuick()`? by Gordon Smyth 52k

What sort of object is `expression`? Does it contain any missing values?

Votes

Answer: BiocParallel_1.40.1.tar.gz not available

Modelling gene program dynamics across time with {lemur}

A: DESeq2 one group vs multiple groups comparison in presence of batch effect

Comment: BiocParallel_1.40.1.tar.gz not available

Awards • All