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Job:
Postdoc+PhD position: AI large-language models of single-cell data for cancer immunogenomics
JobPosting
AI
HPC
CuratedAtlasQueryR
8 months ago
Stefano Mangiola
▴ 40
5
votes
25
replies
2.1k
views
limma models out of memory issue on Slurm HPC
Regression
limma
STATISITICS
HPC
updated 11 months ago by
Gordon Smyth
52k • written 11 months ago by
Jitendra
▴ 10
0
votes
0
replies
559
views
Fatal error: Wrong thread calling 'RunFinalizers'
featureCount
Rsubread
HPC
17 months ago
kthapa
• 0
4
votes
8
replies
3.3k
views
R package installation error
HPC
R
Bioconducter
3.0 years ago
Jitendra
▴ 10
0
votes
0
replies
668
views
Profiling bioconductor packages in a straightforward fashion
HPC
profiling
performance
3.4 years ago
Jack
• 0
2
votes
2
replies
1.7k
views
Problem installing Minfi on Cluster
Minfi
local installation
Centos
hpc
updated 6.9 years ago by
Kasper Daniel Hansen
★ 6.5k • written 6.9 years ago by
Goku
• 0
6 results • Page
1 of 1
Recent ...
Replies
Comment: error in ChAMP loading file
by
shocked.tick.zyet
• 0
Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…
Comment: orgDB
by
jenniferping36
• 0
Thanks for the suggestion! I'll check out the resources.
Comment: sesameDataCache is not work properly on my system
by
Samreen
• 0
Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…
Answer: Using tximport for kallisto aligned TOIL data
by
James W. MacDonald
68k
If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …
Answer: Reading gene expression data in GPR format and converting it to xlsx format
by
James W. MacDonald
68k
Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …
Votes
Answer: Differential expression of proteins using somascan data
Answer: Surprising behavior for DEXseq dispersion estimate plot?
Answer: Handle zero effective gene length when tximport RSEM results
Handle zero effective gene length when tximport RSEM results
How to remove genes with 0 counts in tximport?
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