Bioconductor HPC

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JobPosting AI HPC CuratedAtlasQueryR

9 months ago Stefano Mangiola ▴ 40

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Regression limma STATISITICS HPC

updated 12 months ago by Gordon Smyth 52k • written 12 months ago by Jitendra ▴ 10

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featureCount Rsubread HPC

18 months ago kthapa • 0

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HPC R Bioconducter

3.1 years ago • updated 3.0 years ago Jitendra ▴ 10

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HPC profiling performance

3.5 years ago Jack • 0

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Minfi local installation Centos hpc

updated 7.0 years ago by Kasper Daniel Hansen ★ 6.5k • written 7.0 years ago by Goku • 0

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Comment: BiocParallel_1.40.1.tar.gz not available by Johan • 0

It worked. Thanks :)

Comment: Model performance for spline modelling of RNA-seq timecourses in edgeR by skiaphrene ▴ 10

Dear Gordon, Thank you very much for your prompt reply. I agree with the limma/edgeR perspective of including all potentially explanatory…

Comment: how to use `arrayWeightsQuick()`? by Gordon Smyth 52k

What sort of object is `expression`? Does it contain any missing values?

Answer: Deleted:No significant MVPs with a BH adjusted P-value below 0.05 by shocked.tick.zyet • 0

Dealing with those adjusted p-values in ChAMP can feel like a frustrating game of [Uno Online](https://unoonlinefree.com) , especially when…

Comment: DESeq2 lfcShrink drastic shrinkage by Nick • 0

Did you ever figure out the cause of this? I am seeing very similar results and wondering if you have advice on how you may have resolved t…

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Answer: BiocParallel_1.40.1.tar.gz not available

Modelling gene program dynamics across time with {lemur}

A: DESeq2 one group vs multiple groups comparison in presence of batch effect

Comment: BiocParallel_1.40.1.tar.gz not available

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