Showing : Genetics • reset
0
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3
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1.3k
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Limma - using both array and spot weights in lmFit
Genetics Genetics
written 17.7 years ago by ▴ 170
0
votes
0
replies
278
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Job: Post-Doc: Development of a new method to study the distribution of the effect sizes of QTL
StatisticalMethod Evolution QuantitativeTrailLocus Genetics JobPosting
7 months ago pierre.devillemereuil • 0
0
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0
replies
416
views
accesing gene name RNAseq
genetics GeneticsPed Genetics
13 months ago Gülsüm • 0
0
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0
replies
603
views
Job: Bioinformatics Research Associate, Genomics and Genetics
genomes Genetics
13 months ago JP Carter ▴ 40
0
votes
3
replies
1.1k
views
Multiple Testing When Using Multiple Contrasts/Comparisons in DESEQ2
MultipleComparison DESeq2 Genetics contrasts RNASeq
updated 17 months ago by 67k • written 17 months ago by • 0
3
votes
5
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1.3k
views
calculate distance to a certain sequence in one gene
SummarizedExperiment Genetics
updated 20 months ago by 67k • written 20 months ago by • 0
0
votes
0
replies
1.1k
views
Job: Postdoctoral research scientist in computational biology/statistical genetics/functional genomics at Columbia University, USA
Alzheimer's StatisticalMethod Genetics molecularQTL FunctionalGenomics
2.3 years ago gaow • 0
0
votes
0
replies
1.1k
views
Job: Scientist/Senior Scientist, Statistical Geneticist
Sequencing Genetics GeneticsPed statistics
3.9 years ago António Miguel de Jesus Domingues ▴ 510
0
votes
0
replies
1.3k
views
Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
4.2 years ago Vincent J. Carey, Jr. 6.7k
2
votes
0
replies
1.4k
views
Job: developer/project management position at Harvard Medical School
softwaredevelopment Job job cloudcomputing genetics
4.2 years ago • updated 3.8 years ago Vincent J. Carey, Jr. 6.7k
0
votes
0
replies
2.1k
views
Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
6.5 years ago • updated 4.1 years ago Luo Weijun ★ 1.6k
4
votes
6
replies
1.4k
views
Extremely big genes in annotation TxDb packages
annotation txdb AnnotationData Genetics
updated 4.5 years ago by 67k • written 4.5 years ago by ▴ 10
0
votes
1
reply
1.4k
views
DiffBind - Counting reads - counts not found
diffbind differential analysis genetics #chip-seq
updated 5.8 years ago by ★ 5.2k • written 5.8 years ago by • 0
0
votes
0
replies
1.1k
views
Job: Computational Biology / Genomics Internship at Denali Therapeutics
internship genomics genetics Job
5.8 years ago Steve Lianoglou ★ 13k
0
votes
0
replies
931
views
package for mismatch distribution?
genetics statistics
5.9 years ago myriam.croze07 • 0
1
vote
0
replies
1.3k
views
Job: 2 Postdoc and 2 PhD positions in Regulatory genomics / Rare disease Gagneur lab, TU Munich
genomics genetics machine learning Job
6.1 years ago gagneur ▴ 10
0
votes
1
reply
1.2k
views
Normalization and Quality Control for Multiple scRNAseq Data Sets
normalization rnaseq genetics batch effect dropout
updated 6.2 years ago by ★ 13k • written 6.2 years ago by • 0
0
votes
1
reply
2.0k
views
Get Gene IDs for a list of Gene Names in R
r bioinformatics org.Hs.eg.db genetics
updated 6.5 years ago by 25k • written 6.5 years ago by • 0
1
vote
1
reply
1.1k
views
co-evolution analysis for RNA
genetics
6.6 years ago tg369 ▴ 40
2
votes
0
replies
1.4k
views
Job: Statistical Geneticist at Denali Therapeutics, South San Francisco, CA, USA
job genetics drug development neurodegeneration Job
6.6 years ago sandmann.t ▴ 70
0
votes
0
replies
1.4k
views
Job: Postdoctoral Fellowship in Statistical Genetics and Genomics at the University of Michigan
genetics job biostatistics genomics bioinformatics Job
6.7 years ago xzhousph • 0
1
vote
3
replies
2.3k
views
Gene ID Duplicates
deseq2 genetics Tutorial
updated 6.7 years ago by 67k • written 6.7 years ago by • 0
0
votes
4
replies
13k
views
Normalization by DEseq
Genetics Normalization DESeq Genetics Normalization DESeq
updated 6.8 years ago by • 0 • written 14.2 years ago by ▴ 20
0
votes
0
replies
1.6k
views
fisher exact test pairwise associations between gene mutations
genetics
7.3 years ago wasmetqall • 0
0
votes
0
replies
1.8k
views
Job: Research Co-ordinator (Full Time)
genetics obesity molecular biology biomedical science Job
7.4 years ago njc65 • 0
0
votes
0
replies
1.4k
views
Job: Research Fellow or Junior Research Fellow, Statistical Genetics and Genomics, Australia
biostatistics genetics Job
7.6 years ago hong.lee • 0
0
votes
0
replies
1.7k
views
Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
7.9 years ago • updated 7.7 years ago Luo Weijun ★ 1.6k
0
votes
0
replies
1.7k
views
Job: Postdoctoral Research Associate, Wellcome Trust-MRC Institute of Metabolic Science (Fixed Term)
genetics job genomics postdoc obesity Job
7.8 years ago njc65 • 0
0
votes
1
reply
1.4k
views
Extension to GoogleGenomics: getVariantCalls
GoogleGenomics genetics variants
7.9 years ago Vincent J. Carey, Jr. 6.7k
0
votes
0
replies
1.9k
views
Job: Postdoc / Computational Biologist for circulating tumor DNA/RNA profiling at Memorial Sloan Kettering Cancer Center MSKCC, New York
cancer sequencing genetics genomes diagnostic Job
8.3 years ago dtlabmskcc • 0
0
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0
replies
1.1k
views
What statistical test is appropriate? 2 categorical independent variables, 3 categorical dependent variables, biological replicates
genetics
8.4 years ago efoss ▴ 10
0
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0
replies
1.3k
views
homologue gene conversion worm to human
biomaRt homologue annotation genetics
8.4 years ago Nemo ▴ 80
0
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0
replies
1.1k
views
Genetic Association analysis using four siblings among which three were affected and one was normal
genetics plink linkage disequilibrium
8.5 years ago li lilingdu ▴ 450
2
votes
0
replies
1.6k
views
Job: Two year postdoc position at Trento, Laboratory of Neurogenomic Biomarkers, Italy
job GWAS genetics genomics neuro Job
8.5 years ago enridomenici ▴ 10
1
vote
1
reply
1.7k
views
Question about EAGenes (TCGAbiolinks)
annotation cancer biomart genetics R
updated 8.8 years ago by ▴ 260 • written 8.8 years ago by • 0
1
vote
12
replies
3.6k
views
Problem running summarizeOverlaps()
Genetics Genetics
updated 8.9 years ago by ▴ 10 • written 10.6 years ago by ▴ 140
0
votes
0
replies
1.8k
views
Job: Calling all Clinical Genomic Scientist
computational biology genomics genetics Python java Job
9.5 years ago careers • 0
0
votes
0
replies
1.6k
views
Job: Come apply for our Epidemiologist, AncestryHealth role
genomics genetics design statistics scientist Job
9.5 years ago careers • 0
2
votes
0
replies
2.1k
views
Job: 23andMe Job Opportunities
bioinformatician job bioinformatics scientist genetics Job
9.6 years ago rgentleman ★ 5.5k
1
vote
0
replies
2.2k
views
Job: Bioinformatics / Biostatistics in genetic interaction analysis
high-throughput screening interactions genetics jobs image analysis Job
9.7 years ago Bernd Fischer ▴ 550
3
votes
5
replies
2.7k
views
How to Find Common Dysregulated Genes in Two or More Sets of Microarray Data?
disease genetics micro array data microarray
updated 9.7 years ago by 52k • written 9.7 years ago by ▴ 20
0
votes
0
replies
2.3k
views
Job: Abbvie -- Senior Manager/Associate Director, Exploratory Statistics
genomics genetics proteomics rnaseq microarray Job
9.8 years ago Feng Hong • 0
0
votes
1
reply
4.0k
views
DESeq2 - factor base level changes the DE genes.
RNASeq Genetics DESeq2 RNASeq Genetics DESeq2
updated 10.2 years ago by 43k • written 10.4 years ago by ★ 13k
1
vote
1
reply
1.9k
views
Question about decideTestsDGE()
Genetics edgeR
updated 10.2 years ago by 52k • written 10.4 years ago by ▴ 260
2
votes
0
replies
2.4k
views
Job: Job Opening: Computational Biologist @ Genentech Bioinformatics
Job Sequencing Genetics Cancer
updated 10.3 years ago by ★ 8.2k • written 10.3 years ago by ★ 11k
0
votes
3
replies
2.2k
views
Error running makeTranscriptDbFromGFF in GenomicFeatures
Genetics TranscriptDb GenomicFeatures
updated 10.3 years ago by ★ 11k • written 10.3 years ago by ▴ 260
0
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0
replies
2.4k
views
Plot exon number per gene and transcript lengths
Genetics TranscriptDb GenomicFeatures
10.3 years ago Jon Bråte ▴ 260
0
votes
8
replies
3.1k
views
Expected number of DE genes?
Genetics edgeR DESeq2 Genetics edgeR DESeq2
updated 10.4 years ago by ▴ 750 • written 10.4 years ago by ▴ 140
0
votes
2
replies
1.5k
views
Can my problem be addressed with Bioconductor?
Genetics GOstats SNPchip topGO Genetics GOstats SNPchip topGO
updated 10.5 years ago by 67k • written 10.5 years ago by ★ 13k
0
votes
2
replies
2.3k
views
UCSC data anomaly in 50638 transcript(s): the cds cumulative length is
Genetics GO Regression Cancer TranscriptDb Genetics GO Regression Cancer TranscriptDb
updated 10.6 years ago by ▴ 570 • written 10.6 years ago by 16k
50 results • Page 1 of 1
Recent ...
Replies
Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40
Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …
Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k
limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
Votes
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
A: Expected counts from RSEM in DESeq2
A: Using RSEM reads for DESeq2
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Scholar to James W. MacDonald 67k
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