Bioconductor GOsemsim

Showing : GOsemsim • reset

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279

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AnnotationHub GOSemSim rrvgo

updated 3 hours ago by sergisayolspuig ▴ 80 • written 5 months ago by daccar98 • 0

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697

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GOSemSim similarity

updated 21 months ago by Lluís Revilla Sancho ▴ 760 • written 21 months ago by Giovanni • 0

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973

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GOSim GOSemSim

updated 2.2 years ago by Lluís Revilla Sancho ▴ 760 • written 2.2 years ago by eliska.ochodkova ▴ 10

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2.8k

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GOexpress GO.db GOSemSim

2.4 years ago Chruut • 0

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984

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AnnotationHubSoftware GOSemSim annotation

3.2 years ago Amandeep • 0

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2.5k

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RNASeq edgeR GO GOSemSim

updated 3.2 years ago by Gordon Smyth 52k • written 3.2 years ago by David R ▴ 90

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1.3k

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goSemSim snomed semantic similarity

updated 4.6 years ago by Vincent J. Carey, Jr. 6.7k • written 4.6 years ago by izem.rima • 0

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1.3k

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GOSemSim makeOrgPackage godata

updated 4.8 years ago by James W. MacDonald 68k • written 4.8 years ago by Wojeff • 0

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2.4k

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rrvgo GOSemSim GO.db

4.9 years ago Jenny Drnevich ★ 2.0k

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2.0k

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Guangchuang Yu GOSemSim AnnotationForge

updated 5.0 years ago by Kevin Blighe ★ 4.0k • written 5.0 years ago by Cei • 0

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1.5k

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GOSemSim Dnet

5.8 years ago helenlong1 • 0

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1.0k

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GOSemSim

updated 5.8 years ago by Lluís Revilla Sancho ▴ 760 • written 5.8 years ago by helenlong1 • 0

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3.4k

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GOSemSim S4Vectors

6.1 years ago sergi.picart ▴ 20

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1.3k

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gosemsim mgenesim

6.3 years ago athirak1986 • 0

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1.3k

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gosemsim go enrichment go semantic similarity

6.4 years ago nooshin ▴ 300

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1.5k

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gosemsim

updated 6.4 years ago by Guangchuang Yu ★ 1.2k • written 6.4 years ago by l.willianpacheco • 0

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2.1k

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gosemsim

6.8 years ago anton.kratz ▴ 60

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1.4k

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gosemsim similarity

6.9 years ago ahatashkar • 0

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2.8k

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GOSemSim gosemsim gene ontology

updated 7.2 years ago by ellascottgm • 0 • written 7.2 years ago by anton.kratz ▴ 60

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1.7k

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gosim gosemsim

updated 8.1 years ago by Lluís Revilla Sancho ▴ 760 • written 9.6 years ago by s.apocarpum ▴ 10

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4.1k

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GOsemsim Gene ontology semantic similarity across species

updated 8.4 years ago by Guangchuang Yu ★ 1.2k • written 8.4 years ago by saadmurtazakhan ▴ 10

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1.9k

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Ensembl GOsemsim GO semantic similarity

updated 8.7 years ago by Guangchuang Yu ★ 1.2k • written 8.7 years ago by saadmurtazakhan ▴ 10

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1.8k

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gosemsim

9.0 years ago bnembarekmarwa • 0

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1.4k

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GOSemSim mgeneSim

updated 9.0 years ago by Guangchuang Yu ★ 1.2k • written 9.0 years ago by ረ • 0

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3.3k

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gene ontology GOSemsim

updated 9.7 years ago by Paulson, Ariel ▴ 10 • written 10.0 years ago by anupambtech2007 • 0

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2.3k

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gosemsim go gene ontology

10.0 years ago cpcantalapiedra • 0

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2.1k

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GOSemSim yeast

updated 10.2 years ago by Guangchuang Yu ★ 1.2k • written 10.2 years ago by horcsct ▴ 10

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1.9k

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enrichment genesetenrichment dose gosemsim

10.4 years ago Guangchuang Yu ★ 1.2k

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1.7k

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GO GOSemSim GO GOSemSim

updated 11.4 years ago by Guangchuang Yu ★ 1.2k • written 11.4 years ago by Guest User ★ 13k

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1.4k

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GO GOSemSim GO GOSemSim

12.6 years ago Guangchuang Yu ★ 1.2k

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1.1k

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GO GOSemSim GO GOSemSim

12.7 years ago Guest User ★ 13k

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1.6k

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GO SemSim GOSemSim GO SemSim GOSemSim

updated 12.8 years ago by Guangchuang Yu ★ 1.2k • written 12.8 years ago by Guest User ★ 13k

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1.3k

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Yeast GOSemSim Yeast GOSemSim

updated 12.9 years ago by Dan Tenenbaum ★ 8.2k • written 12.9 years ago by Katharine Coyte ▴ 10

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1.4k

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Annotation GO Yeast biomaRt GOSemSim GOSim Annotation GO Yeast biomaRt GOSemSim GOSim

updated 15.6 years ago by Marc Carlson ★ 7.2k • written 15.6 years ago by Gang Chen ▴ 20

34 results • Page 1 of 1

Recent ...

Replies

Answer: CluserProfiler message "No gene can be mapped" by James W. MacDonald 68k

Your gene IDs are things like this: `Mpyr-NLJ1B.v3.hap1.scaffold1.g290550`, and the genes in your term2gene table are things like this: `Mp…

Answer: RNA-seq input to GRaNIE by James W. MacDonald 68k

This is [covered in the vignette.][1] [1]: https://bioconductor.org/packages/release/bioc/vignettes/GRaNIE/inst/doc/GRaNIE_packageDe…

Answer: Help using reduceSimMatrix with a custom annotation by sergisayolspuig ▴ 80

Hi there, `reduceSimMatrix()` expects a "GOALL" keytype in the OrgDb object when called with `children=TRUE` (which is the default for thi…

Answer: Analyzing TnSeq data with DESeq2 by cold.wolverine.arku • 0

That's a great use case of DESeq2! Even though it's not specifically tailored for TnSeq data, your approach to normalize and run explorator…

Comment: RNA Seq using Lrt by Rob • 0

So if I have understood what you have said : If i want to see if Day (time) has an effect / is being tested - then the reduced model should…

Votes

A: Unbalanced experiment with multiple samples from each patient.

A: Understanding contrasts limma

Answer: ROAST for small sets

A: conceptual question about FDR, FDR adjusted p-value and q-value

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