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GOTHiC
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9
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1.7k
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from denove contig assembly to chromosome bins
diffhic
gothic
hicup
hic-c
hic
updated 5.8 years ago by
Aaron Lun
★ 28k • written 5.8 years ago by
mictadlo
▴ 10
0
votes
1
reply
1.0k
views
Error in scanBam(bam_fn) : could not find function "scanBam"
hic
diffhic
gothic
hicup
hic-c
5.8 years ago
mictadlo
▴ 10
0
votes
3
replies
1.1k
views
GOTHiC's GOTHiC's function fails with bwa input
GOTHiC
6.0 years ago
alongalor
▴ 10
0
votes
0
replies
889
views
GOTHiC odd output
gothic
8.3 years ago
manduchi
▴ 10
0
votes
3
replies
1.8k
views
GOTHiC hg19 error
GOTHiC
hic
9.0 years ago
Nathan Sheffield
▴ 10
4
votes
20
replies
2.7k
views
scaling loess curves
HiTC
gothic
diffhic
HiC
9.1 years ago
Bogdan
▴ 670
0
votes
1
reply
3.9k
views
Error in FUN(X[[i]], ...) : subscript out of bounds
bioconductor
gothic
R
updated 9.3 years ago by
Vicky_Tche
• 0 • written 9.4 years ago by
sv380
• 0
0
votes
0
replies
1.2k
views
GOTHiC seqlevel bug
GOTHiC
software error
9.4 years ago
bef22
• 0
8 results • Page
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Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 20
Hi Maria, so what is the code you are using? By the 3rd way to conduct the analysis do you mean looking at the interaction model from part …
Comment: miRTarRnaseq library
by
María Calvo
• 0
Hello, in line with the previous questions, when the miRNA-mRNA interaction analysis is performed (3 rd way to conduct the analysis), I obt…
Answer: heatmap with batch effect
by
James W. MacDonald
67k
You have only one condition in the second batch, so it's not possible to remove the batch effect. You can probably adjust for it somewhat, …
Answer: how do I convert an Ilumn IDREF to a CPG loci
by
James W. MacDonald
67k
``` > library(IlluminaHumanMethylationEPICanno.ilm10b4.hg19) > Locations DataFrame with 865859 rows and 3 columns ch…
Answer: Which input data is acceptable for MAST?
by
Andrew_McDavid
▴ 270
Not too familiar with SCT v2. If it also has a point-mass at zero and the non-zero component is roughly-symmetric, then it might work ok w…
Votes
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Comment: Convert HGVS Representation back to Reference Genome Coordinates
Answer: How to control batch effect if Group and batch are same?
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