Bioconductor GOTHiC

Showing : GOTHiC • reset

votes

replies

1.8k

views

diffhic gothic hicup hic-c hic

updated 6.1 years ago by Aaron Lun ★ 28k • written 6.1 years ago by mictadlo ▴ 10

votes

1.1k

views

hic diffhic gothic hicup hic-c

6.1 years ago mictadlo ▴ 10

votes

replies

1.2k

views

GOTHiC

6.3 years ago alongalor ▴ 10

votes

replies

932

views

gothic

8.6 years ago manduchi ▴ 10

votes

replies

1.8k

views

GOTHiC hic

9.4 years ago • updated 9.3 years ago Nathan Sheffield ▴ 10

votes

replies

2.9k

views

HiTC gothic diffhic HiC

9.4 years ago Bogdan ▴ 670

votes

3.9k

views

bioconductor gothic R

updated 9.6 years ago by Vicky_Tche • 0 • written 9.7 years ago by sv380 • 0

votes

replies

1.3k

views

GOTHiC software error

9.7 years ago bef22 • 0

8 results • Page 1 of 1

Recent ...

Replies

Answer: WGCNA sample-data preprocessing order by ATpoint ★ 4.6k

Hi, WGCNA is not a Bioconductor package, please read the documentation to get guidance. See https://support.bioconductor.org/p/9155561/. …

Answer: WGCNA: Can we use high power (26) for signed network? by ATpoint ★ 4.6k

Hi, WGCNA is not a Bioconductor package, please read the documentation to get guidance. See https://support.bioconductor.org/p/9155561/. C…

Answer: Ph.D. scholar by ATpoint ★ 4.6k

Hi, WGCNA is not a Bioconductor package, please read the documentation to get guidance. See https://support.bioconductor.org/p/9155561/. C…

Comment: Recount3 data correspond to TCGA data by Fep29 • 0

Hi, This the solution to mapping TCGA ids in Recount3 to the ids used in the TCGA barcodes: library(recount3) human_projects <- …

Answer: Unable to find sample sheet file for ChAMP methylation data analysis by James W. MacDonald 67k

There is an example file in the extdata directory of the `minfiData` package that you could emulate.

Votes

Answer: DESeq2- merging technical vs biological replicates

Answer: SingleCellExperiment convenience function for metadata+expression?

How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.

Answer: EdgeR Biological CVs

Answer: Error in download.file for TCGAutils::symbolsToRanges

Awards • All

Popular Question to Robert Ivanek ▴ 750