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News: Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
Asia BioCAsia Conferences Events BioC
written 2.2 years ago by ▴ 740
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News: European Bioconductor Conference 2023 planning
Europe Conference EuroBioC Events News
written 2.2 years ago by ▴ 90
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News: News: BioCAsia2023 Abstract Submission & Registration Now Open!
Events BioCAsia Conference
16 months ago Maria Doyle ▴ 90
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News: Bioconductor call for events!
Bioconductor events community
23 months ago Maria Doyle ▴ 90
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News: Registrations are now open for BioC Asia 2022
Asia BioCAsia Conferences Events News
2.3 years ago • updated 2.2 years ago Peter Hickey ▴ 740
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News: Public Calendar of Events
Bioconductor events News
4.7 years ago shepherl 4.1k
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News: EMBO | EMBL Symposium: The Molecular Basis and Evolution of Sexual Dimorphism
events biology sexual dimorphism conference News
5.0 years ago EMBL Events • 0
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News: Registrations are now open for BioC Asia 2019
BioC Asia Events Conferences Bioinfosummer News
5.4 years ago Steve Pederson ▴ 170
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Comment: contrast matrix design for a continuous variable by dtzhu337 • 0
Hi Gordon, Thank you very much for your answer. Actually the variable X is the age, which I am also interested in. Somehow, age and V1 are…
Answer: SingleCellExperiment convenience function for metadata+expression? by Peter Hickey ▴ 740
Hi Sarah, `scuttle::makePerCellDF()` / `scuttle::makePerFeatureDF()` and `scater::ggcells()` / `scater::ggfeatures()`, which build upon th…
Comment: How to sort negative log2FC or FC in RNAseq for GSEA? by QN ▴ 10
Thank you ATpoint for your response! In the result of GSEA, like you indicated, there will be gene sets that have positive NES and gene se…
Comment: EdgeR Biological CVs by ATpoint ★ 4.6k
"Joseph" is a spam bot...
Answer: How to sort negative log2FC or FC in RNAseq for GSEA? by ATpoint ★ 4.6k
GSEA asks whether there are general shifts in gene expression towards certain terms. Hence, you would not split your results tables but ord…
Votes
How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.
Answer: EdgeR Biological CVs
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
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Popular Question to Joseph Fass ▴ 70
Popular Question to Peter Hickey ▴ 740
Popular Question to Gordon Smyth 52k
Popular Question to Dario Strbenac ★ 1.5k
Popular Question to Bob ▴ 10
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