Showing : EPICv2manifest • reset
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CpGs with genomic positions greater than the chromosome size in EPICv2?
EPICv2 EPICv2manifest
4 weeks ago • updated 27 days ago Joshua Llano • 0
0
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2
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271
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Conumee2 - CNV.summaryplot()
conumee CopyNumberVariation MethylationAnalysis methylationArrayAnalysis EPICv2manifest
updated 7 weeks ago by 68k • written 7 weeks ago by • 0
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Methylation data - different probes are classified differently based on transcript? (Illumina methylation arrays, using minfi)
minf minfiDataEPIC MethylationArrayData MethylationArray EPICv2manifest
10 weeks ago charlie.wright • 0
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2
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394
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MissMethyl failed to use gometh function for EPICv2
missMethyl EPICv2manifest
updated 3 months ago by 68k • written 3 months ago by • 0
1
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2
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424
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Epic v2 Annotation CpG_maf source?
MethylationArray methy EPICv2manifest
4 months ago Meghan • 0
2
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2
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529
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preprocessIllumina error with EPICv2 array
minfi EPICv2manifest
5 months ago Rakesh • 0
0
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0
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379
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EPIC v2 annotation and BigWig
EPICv2manifest IlluminaHumanMethylationEPICv2anno.20a1.hg38
9 months ago MajaVu • 0
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0
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530
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Problem with MethylAid ("Cannot get Manifest object for an 'Unknown' array") and Epicv2
minfi EPICv2manifest MethylAid
9 months ago pcibin • 0
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3
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1.5k
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SeSAMe DMR for EPIC V2
sesame EPICv2manifest epicv2
10 months ago luca.s ▴ 50
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3
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2.5k
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CombineArrays for EPIC and EPIC V2
EPICV1 Methylation combineArrays minifi EPICv2manifest
updated 6 months ago by • 0 • written 12 months ago by • 0
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6
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1.3k
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unable to access Annotationhub latest record
DNAMethylation AnnotationHub EPICv2manifest annotation
updated 12 months ago by ▴ 230 • written 12 months ago by • 0
11 results • Page 1 of 1
Recent ...
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Answer: Analyzing TnSeq data with DESeq2 by cold.wolverine.arku • 0
That's a great use case of DESeq2! Even though it's not specifically tailored for TnSeq data, your approach to normalize and run explorator…
Comment: RNA Seq using Lrt by Rob • 0
So if I have understood what you have said : If i want to see if Day (time) has an effect / is being tested - then the reduced model should…
Comment: How to convert transcript counts to gene counts in R? by ben • 0
Simply summing transcripts by gene is sufficient for use with DESeq2. [sprunki clicker][1] [1]: https://sprunkiclicker.com/
Answer: EuroBioC2024 abstract submission is open! by Ali • 0
[Promo products][1] are a smart way to boost visibility, especially with exciting updates like *News: EuroBioC2024 abstract submission is o…
Answer: ROAST for small sets by Gordon Smyth 52k
The p-values from `mroast` will be the same (up to sampling variability associated with random rotations) regardless of whether you test al…
Votes
A: Unbalanced experiment with multiple samples from each patient.
A: Understanding contrasts limma
Answer: ROAST for small sets
Answer: ROAST for small sets
A: conceptual question about FDR, FDR adjusted p-value and q-value
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