Bioconductor Des

Showing : Des • reset

votes

627

views

DESeq2 DES

updated 3.4 years ago by Michael Love 42k • written 3.4 years ago by heikki.sarin ▴ 10

votes

572

views

DES DESIGN

updated 20 months ago by Michael Love 42k • written 20 months ago by mike • 0

votes

518

views

DESeq2 des

updated 17 months ago by Michael Love 42k • written 18 months ago by Devin • 0

votes

replies

423

views

DESeq2 RUVSeq RUVseq BatchEffect DES

updated 21 days ago by James W. MacDonald 65k • written 21 days ago by Alexandre • 0

votes

replies

243

views

DESeq2 DEs

8 weeks ago feather-W • 0

votes

149

views

Des DESeq2

updated 4 weeks ago by hemantcnaik • 0 • written 4 weeks ago by Sahar • 0

6 results • Page 1 of 1

Recent ...

Replies

Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360

So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!

Votes

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?

Awards • All