Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Decipher
•
reset
0
votes
2
replies
213
views
DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
DECIPHER
7 weeks ago
makala
• 0
0
votes
0
replies
209
views
LearnTaxa with custom Silva
DECIPHER
LearnTaxa
12 weeks ago
Eryn
• 0
0
votes
2
replies
947
views
convert sequences disambiguated with DECIPHER back to FASTA
DECIPHER
FASTA
disambiguate
written 4.1 years ago by
joannew
• 0
0
votes
3
replies
837
views
DECIPHER IdTaxa: Speed up training?
DECIPHER
idtaxa
updated 12 months ago by
Erik Wright
▴ 150 • written 12 months ago by
Till
▴ 30
3
votes
5
replies
1.8k
views
Error: 'IdClusters'
DECIPHER
updated 13 months ago by
Ling-Hsiu
▴ 10 • written 17 months ago by
julieta.micorriza
• 0
0
votes
0
replies
403
views
Updating 16S training set with LearnTaxa
DECIPHER
19 months ago
Connor
• 0
0
votes
3
replies
1.1k
views
Problem with multiple sequence alignment using AlignSeqs
R
dada2
DECIPHER
updated 19 months ago by
Erik Wright
▴ 150 • written 19 months ago by
Nelli
• 0
0
votes
1
reply
747
views
OligoArrayAux fails to compile
DECIPHER
19 months ago
fabian.roger08
▴ 10
0
votes
3
replies
1.3k
views
Issue::DesignPrimers DECIPHER
DECIPHER
DesignPrimers
updated 2.8 years ago by
slwmartin
• 0 • written 2.8 years ago by
Mailys
• 0
0
votes
1
reply
808
views
ORF finding in DECIPHER
ORF
DECIPHER
ORFhunteR
updated 3.1 years ago by
Erik Wright
▴ 150 • written 3.1 years ago by
tkirkland
• 0
0
votes
5
replies
2.3k
views
Do DECIPHER:IdTaxa / dada2::assignTaxonomy work with ambigious reference training set?
decipher
dada2
updated 3.1 years ago by
fabian.roger08
▴ 10 • written 4.4 years ago by
fabian.roger
• 0
0
votes
5
replies
1.6k
views
DECIPHER maximum allowable size
DECIPHER
Alignment
alig
updated 3.1 years ago by
Erik Wright
▴ 150 • written 3.1 years ago by
curiousmind007
▴ 10
0
votes
0
replies
999
views
DECIPHER Package on dada2 -Implementing Silva_metaxa2 training set from qza file into a fastq.gz/.Rdata
DECIPHER
dada2
3.2 years ago
anrongloh
• 0
0
votes
1
reply
883
views
Defining groups in Decipher by sequence position in the database (FASTA)
DefiningGroups
RStudio
DECIPHER
Specificprimers
updated 3.4 years ago by
Erik Wright
▴ 150 • written 3.4 years ago by
noeliaruizalonso23
• 0
0
votes
5
replies
1.9k
views
Program not properly installed/program not accessible by system
R
decipher
updated 3.3 years ago by
Erik Wright
▴ 150 • written 4.2 years ago by
hoonhuiyi
• 0
0
votes
0
replies
821
views
DECIPHER Probe Design Questions
DECIPHER
3.6 years ago
henry1995910343
• 0
0
votes
2
replies
840
views
insufficient alignment
DECIPHER
Alignment
3.7 years ago
julius_vn
• 0
0
votes
3
replies
1.8k
views
DECIPHER save alignement in outputs
msa
decipher
output
prettyPrint
updated 3.8 years ago by
UBod
▴ 290 • written 3.8 years ago by
matamunee
• 0
1
vote
6
replies
1.9k
views
Issue with DECIPHER::IdTaxa
DECIPHER
IdTaxa
3.8 years ago
sebastian.mynott
• 0
0
votes
2
replies
992
views
how to design probes using decipher
R
decipher
4.2 years ago
hoonhuiyi
• 0
0
votes
5
replies
4.0k
views
Error in (function (classes, fdef, mtable)
software error
DECIPHER
updated 4.2 years ago by
shepherl
3.9k • written 4.2 years ago by
hoonhuiyi
• 0
0
votes
21
replies
3.1k
views
How to use DECIPHER to design group-specific primers
Decipher
4.2 years ago
hoonhuiyi
• 0
0
votes
1
reply
959
views
DECIPHER::AlignSeqs fails with a large guide tree
DECIPHER
updated 4.5 years ago by
Erik Wright
▴ 150 • written 4.5 years ago by
brendan.furneaux
▴ 10
0
votes
1
reply
763
views
PCR simulation with PNAs
PCR
DECIPHER
PNA
4.8 years ago
marissaruthlee
• 0
1
vote
2
replies
1.5k
views
Display BrowseSeqs output in R Notebook?
BrowseSeqs
DECIPHER
notebook
rmarkdown
updated 4.8 years ago by
Erik Wright
▴ 150 • written 4.8 years ago by
lauren.fitch
• 0
0
votes
0
replies
681
views
Alignment larger than the maximum allowable size
DECIPHER
updated 5.0 years ago by
shepherl
3.9k • written 5.0 years ago by
cmasembe
• 0
2
votes
4
replies
1.8k
views
How to get sequence homology percent from a multiple sequence alignment in DECIPHER?
decipher
r
protein alignment
6.2 years ago
reubenmcgregor88
• 0
2
votes
2
replies
2.0k
views
How to combine sequences from different stringsets?
biostrings
decipher
updated 6.4 years ago by
Mike Smith
★ 6.5k • written 6.4 years ago by
reubenmcgregor88
• 0
1
vote
3
replies
1.3k
views
Transform index to chromosome in DECIPHER package
decipher
updated 6.5 years ago by
Erik Wright
▴ 150 • written 6.5 years ago by
Vinicius Henrique da Silva
▴ 40
5
votes
7
replies
1.7k
views
Is it possible to do an alignment to a chosen reference sequence in DECIPHER?
R
decipher
biostrings
updated 6.5 years ago by
Erik Wright
▴ 150 • written 6.5 years ago by
reubenmcgregor88
• 0
0
votes
2
replies
1.1k
views
Is it possible to import many .tsr sequence file into R using bio strings for use in DECIPHER?
r
biostrings
decipher
6.5 years ago
reubenmcgregor88
• 0
2
votes
5
replies
1.7k
views
Colour a phylogenetic tree, based on column in DECIPHER?
r
decipher
biostrings
updated 6.5 years ago by
Erik Wright
▴ 150 • written 6.5 years ago by
reubenmcgregor88
• 0
2
votes
3
replies
1.9k
views
Is it possible to import a multiple fasta alignemnt (.mfa) file into DECIPHER?
decipher
DNA
biostrings
updated 6.5 years ago by
Erik Wright
▴ 150 • written 6.5 years ago by
reubenmcgregor88
• 0
0
votes
1
reply
1.3k
views
DECIPHER - AlignSeqs error is.leaf(dend) node stack overflow
decipher
alignment
updated 6.7 years ago by
Erik Wright
▴ 10 • written 6.7 years ago by
emma.berdan
• 0
0
votes
1
reply
1.6k
views
AlignSeqs error: protect(): protection stack overflow
multiplealignment
decipher
6.8 years ago
c.l.frankling
• 0
2
votes
5
replies
1.9k
views
Multiple Sequence Alignment using DNA sequence
msa
decipher
7.1 years ago
bbista91
▴ 10
1
vote
5
replies
1.6k
views
DECIPHER version bug using biocLite()
DECIPHER
8.1 years ago
Vinicius Henrique da Silva
▴ 40
0
votes
1
reply
983
views
Possible bug in ConsensusSequence
DECIPHER
updated 8.2 years ago by
Erik Wright
▴ 10 • written 8.2 years ago by
rob.lanfear
• 0
0
votes
3
replies
2.7k
views
mt.teststat
multtest
DECIPHER
multtest
DECIPHER
updated 8.5 years ago by
Smeeta Shrestha
▴ 20 • written 21.3 years ago by
Park, Richard
▴ 220
0
votes
0
replies
1.6k
views
Job: Bioinformatics Postdoc Position at the IMB, Mainz
Genetics
DECIPHER
Genetics
DECIPHER
10.3 years ago
Kathi Zarnack
▴ 110
0
votes
1
reply
1.2k
views
Agi4x44PreProcess: Replicated Genes and Custom Annotation Database
Annotation
zebrafish
probe
DECIPHER
Annotation
zebrafish
probe
DECIPHER
updated 13.9 years ago by
Marc Carlson
★ 7.2k • written 13.9 years ago by
Samantha England
▴ 40
0
votes
1
reply
1.8k
views
boxplot error with expression set using oligo package and Human gene st 1.0 arrays
oligo
DECIPHER
oligo
DECIPHER
updated 14.1 years ago by
Benilton Carvalho
★ 4.3k • written 14.1 years ago by
jos matejus
▴ 40
0
votes
0
replies
1.2k
views
Basic Question about gcrma & exporting to excel > (command not working)
Microarray
affy
gcrma
oligo
arrayQualityMetrics
DECIPHER
Microarray
affy
gcrma
oligo
14.1 years ago
Dick Beyer
★ 1.4k
0
votes
0
replies
1.5k
views
'Heat Map for Genes in Dataset' in the '(project name).global.plots.pdf' output of the R-GSEA code
Genetics
Clustering
DECIPHER
Genetics
Clustering
DECIPHER
14.3 years ago
Radek Blatny
▴ 60
0
votes
0
replies
1.7k
views
Post-doc position in Paris
Sequencing
Epigenetics
Cancer
Breast
DECIPHER
Sequencing
Epigenetics
Cancer
Breast
15.0 years ago
Joern Toedling
▴ 450
0
votes
4
replies
1.4k
views
help with large Rgraphviz output
graph
DECIPHER
graph
DECIPHER
updated 18.1 years ago by
Seth Falcon
★ 7.4k • written 18.1 years ago by
Kimpel, Mark W
▴ 890
46 results • Page
1 of 1
Recent ...
Replies
Comment: limma comparison for small sample size and how to get covariance matrix
by
Gordon Smyth
51k
Your MDS plot is better than before, but you are still not following the recommendation for making for making such plots given in the limma…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Also, ``` > result <- mapUniProt( from = "EMBL-GenBank-DDBJ_CDS", to = "UniProtKB", query = c("ACF95883.1") ) > result From…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Ugh, here's the link https://www.uniprot.org/id-mapping/uniprotkb/dd08aa16774d98ef087dc3bd708582012bba49e2/overview?fields=accession%2Cre…
Answer: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
The input should be 'EMBL-GenBank-DDBJ_CDS", as that is a GenBank ID.
Answer: XCMS2 of orbitrap data
by
Elodie
• 0
Hi, I have the same question, I have acquired MS2 data with PRM analysis and inclusion lists of several ions. I have a list of product ion…
Votes
Answer: EPIC array hg38 annotation?
Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
Awards
• All
Popular Question
to
jonellevillar
• 0
Popular Question
to
twtoal
▴ 10
Popular Question
to
mikat
• 0
Popular Question
to
mohammedtoufiq91
▴ 10
Popular Question
to
ATpoint
★ 4.2k
Locations
• All
India,
21 minutes ago
India,
23 minutes ago
United States,
56 minutes ago
United States,
1 hour ago
WEHI, Melbourne, Australia,
1 hour ago
Traffic: 1130 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6