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CyToF
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759
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flow cytometry differential expression through time
cytofWorkflow
cytof
diffcyt
3.5 years ago
achaillon
• 0
0
votes
0
replies
1.5k
views
Error from FlowSom to Cytofast
Cytofast
FlowSom
CyTOF
fcs files
3.7 years ago
domenico.somma
• 0
1
vote
5
replies
1.1k
views
CyTOF Differential Abundance Analysis using DESeq2
deseq2
mass cytometry
CyTOF
updated 3.7 years ago by
Michael Love
42k • written 3.7 years ago by
mikhael.manurung
▴ 280
0
votes
0
replies
659
views
Concatenating different runs from the same pool of barcoded CyTOF samples
batch effect
cytof
4.3 years ago
mikhael.manurung
▴ 280
1
vote
6
replies
1.7k
views
Re: Cydar. Can I Normalize CyTOF data with just one FCS file/batch and if so, which normalization mode is recommended?
Cydar
CyTOF
normalization
updated 4.8 years ago by
Aaron Lun
★ 28k • written 4.8 years ago by
ghogg
• 0
2
votes
4
replies
963
views
Cydar's countCells tolerance parameter for arcsinh-transformed data
cydar
CyTOF
updated 5.4 years ago by
Aaron Lun
★ 28k • written 5.4 years ago by
mikhael.manurung
▴ 280
2
votes
2
replies
1.4k
views
Cytofkit - Trouble with writing files after performing the analysis
cytofkit
cytof
write.csv
output
updated 7.7 years ago by
chen_hao
▴ 30 • written 7.7 years ago by
cjackson13
• 0
1
vote
2
replies
2.8k
views
Errors when reading CyToF flowSet into flowCore
flowCore
flowcore
CyToF
Rtsne
updated 8.9 years ago by
Jiang, Mike
★ 1.3k • written 8.9 years ago by
clevy
▴ 10
8 results • Page
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Comment: limma comparison for small sample size and how to get covariance matrix
by
Gordon Smyth
51k
Your MDS plot is better than before, but you are still not following the recommendation for making for making such plots given in the limma…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Also, ``` > result <- mapUniProt( from = "EMBL-GenBank-DDBJ_CDS", to = "UniProtKB", query = c("ACF95883.1") ) > result From…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Ugh, here's the link https://www.uniprot.org/id-mapping/uniprotkb/dd08aa16774d98ef087dc3bd708582012bba49e2/overview?fields=accession%2Cre…
Answer: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
The input should be 'EMBL-GenBank-DDBJ_CDS", as that is a GenBank ID.
Answer: XCMS2 of orbitrap data
by
Elodie
• 0
Hi, I have the same question, I have acquired MS2 data with PRM analysis and inclusion lists of several ions. I have a list of product ion…
Votes
Problems to install a package - Ubuntu
BiocCheck incorrectly reports I'm not registered on this site
Answer: EPIC array hg38 annotation?
Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
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