Bioconductor CyTOF

Showing : CyTOF • reset

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989

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cytofWorkflow cytof diffcyt

4.3 years ago achaillon • 0

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1.7k

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Cytofast FlowSom CyTOF fcs files

4.6 years ago domenico.somma • 0

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1.4k

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deseq2 mass cytometry CyTOF

updated 4.6 years ago by Michael Love 43k • written 4.6 years ago by mikhael.manurung ▴ 280

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837

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batch effect cytof

5.1 years ago mikhael.manurung ▴ 280

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2.2k

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Cydar CyTOF normalization

updated 5.6 years ago by Aaron Lun ★ 28k • written 5.6 years ago by ghogg • 0

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1.3k

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cydar CyTOF

updated 6.2 years ago by Aaron Lun ★ 28k • written 6.2 years ago by mikhael.manurung ▴ 280

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1.6k

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cytofkit cytof write.csv output

updated 8.5 years ago by chen_hao ▴ 30 • written 8.5 years ago by cjackson13 • 0

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3.1k

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flowCore flowcore CyToF Rtsne

updated 9.7 years ago by Jiang, Mike ★ 1.3k • written 9.7 years ago by clevy ▴ 10

8 results • Page 1 of 1

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Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Comment: Feature Counts - potential bug with outfile.jcounts by Tom • 0

[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…

Comment: Filtering after DESeq by caroline.zanchi • 0

I am going to try this right now, thanks !

Comment: Bioconductor 3.20 Release Schedule by randyprice13102000 • 0

This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/

Comment: Filtering after DESeq by ATpoint ★ 4.8k

The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …

Votes

Answer: CluserProfiler message "No gene can be mapped"

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

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