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Answer: Differential Expression Analysis with unbalanced batches without replication bet
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Gordon Smyth
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> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…
Comment: BiomaRt Possible Ensembl SSL connectivity problems detected.
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Adam
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0
I just found this workaround:
httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE))
at [this Stack Overflow link][…
Comment: Problem at champ.load
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icecreamlover
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Hello! Were you able to figure this out? I am running into the same error!
Comment: ChAMP - obtaining beta values using EPICv2 annotation
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icecreamlover
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Hello,
Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…
Comment: BiomaRt Possible Ensembl SSL connectivity problems detected.
by
Adam
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0
Can this please be revisited and corrected ASAP? I'm encountering the same issue, using a slightly more modern version of R (4.1.0). It s…
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