Bioconductor ConsensusClusterPlus

Showing : ConsensusClusterPlus • reset

votes

replies

549

views

ConsensusClusterPlus RNASeqData

12 months ago Diana • 0

vote

replies

15k

views

Bioconductor ConsensusClusterPlus

updated 18 months ago by Mehdi • 0 • written 2.1 years ago by k.wickstrom • 0

votes

replies

430

views

ConsensusClusterPlus

20 months ago hsin hsiung • 0

votes

replies

559

views

ConsensusClusterPlus

2.2 years ago William • 0

votes

replies

1.1k

views

Clustering ConsensusClusterPlus

3.4 years ago Gian ▴ 30

votes

replies

1.6k

views

consensusclusterplus heatmap

5.5 years ago niki.nowhere • 0

votes

1.5k

views

consensusclusterplus distance clustering

updated 5.8 years ago by chris86 ▴ 420 • written 5.8 years ago by neuro3030 • 0

votes

1.2k

views

EdgeR clustering differential gene expression consensusclusterplus kmeans

updated 6.8 years ago by Aaron Lun ★ 28k • written 6.8 years ago by anupriya.dalmia • 0

votes

replies

1.3k

views

consensusclusterplus microarray clustering

6.8 years ago aagata.szymanek • 0

votes

1.5k

views

ConsensusClusterPlus calcICL plot

8.2 years ago • updated 7.7 years ago juan-pablo.cerapio-arroyo ▴ 10

votes

replies

1.6k

views

flowsom consensusclusterplus

7.9 years ago Lukas Weber • 0

vote

2.7k

views

bioconductor clustering consensusclusterplus

8.0 years ago kyn ▴ 10

votes

replies

1.0k

views

ConsensusClusterPlus

8.1 years ago Jane Merlevede ▴ 90

votes

replies

1.7k

views

consensusclusterplus

8.1 years ago Jane Merlevede ▴ 90

votes

1.9k

views

bioconductor consensusclusterplus clustering

8.3 years ago afraTW • 0

votes

replies

2.2k

views

consensusclusterplus clustering

9.2 years ago philipp24 ▴ 30

votes

replies

1.8k

views

Clustering ConsensusClusterPlus Clustering ConsensusClusterPlus

11.8 years ago Matthew D. Wilkerson ▴ 20

votes

replies

1.3k

views

ConsensusClusterPlus ConsensusClusterPlus

13.7 years ago Matt Wilkerson ▴ 20

votes

replies

1.0k

views

ConsensusClusterPlus ConsensusClusterPlus

14.7 years ago Matt Wilkerson ▴ 20

19 results • Page 1 of 1

Recent ...

Replies

Answer: I am having issues with bowtie2_build by James W. MacDonald 67k

Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…

Answer: DEG analysis across multiple timepoints, treatments and tissues by Michael Love 43k

Yes, if you think the entire time course can be modified by tissue effects then you would include another set of interaction terms. I re…

Comment: How to visualize these pathways using pathview by Guido Hooiveld ★ 4.1k

FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…

Comment: Why select top highly expressed genes based on normalized counts, but then plot by Quang NN ▴ 10

I see. Thank you ATpoint!

Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by Prakash Sah • 0

Thanks James!

Votes

Answer: Unable to install nloptr

Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?

C: How does edgeR cpm function calculate log(CPM) values?

Answer: Selection of correct coefficients or contrasts in DESeq2

Awards • All

Popular Question to bastien_chassagnol • 0