Bioconductor Chromosome

Showing : Chromosome • reset

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1.1k

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gene chromosome proteincodinggene

24 months ago Liliian • 0

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2.5k

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GenomicRanges split chromosome TxDb

updated 3.3 years ago by Hervé Pagès 16k • written 3.3 years ago by jon.klonowski ▴ 40

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14k

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SNP rs id Biomart Chromosome coordinates

updated 21 months ago by James W. MacDonald 68k • written 4.6 years ago by Mahan • 0

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1.0k

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Chromosome Annotation

updated 4.7 years ago by James W. MacDonald 68k • written 4.7 years ago by Bine ▴ 50

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1.1k

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tximport GCF feature table parsing error chromosome

updated 5.0 years ago by Michael Love 43k • written 5.0 years ago by knholm • 0

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748

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RefSeq Chromosome Mutalyzer

5.0 years ago heiko_kin ▴ 60

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677

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edgeR chromosome RNAseq

updated 5.0 years ago by swbarnes2 ★ 1.4k • written 5.0 years ago by missmoparker • 0

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1.0k

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homo sapiens chromosome

updated 6.9 years ago by James W. MacDonald 68k • written 6.9 years ago by xchen8 • 0

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2.6k

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bsgenome chromosome reference genome

updated 7.1 years ago by Hervé Pagès 16k • written 7.1 years ago by Nathan Sheffield ▴ 10

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Gviz chromosome ideogram

updated 8.1 years ago by bernatgel ▴ 150 • written 8.1 years ago by dulunar ▴ 10

10 results • Page 1 of 1

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Comment: DESeq2 - human data, weird results, troubleshooting by bd2000 ▴ 30

I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin by James W. MacDonald 68k

The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…

Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0

Thank you so much for sharing the link.

Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0

I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…

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Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin

Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

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