Bioconductor Biseq

Showing : Biseq • reset

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671

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BiSeq

2.4 years ago thomas.koefoed • 0

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779

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Biseq Methylation DMP DMR RRBS

4.0 years ago i.s.castanho • 0

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975

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bedgraph .cov wig biseq coverage

4.0 years ago akhaira • 0

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765

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BiSeq testClusters error dmr

4.0 years ago akhaira • 0

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1.0k

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biseq beta regression

4.0 years ago akhaira • 0

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502

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Biseq

4.0 years ago akhaira • 0

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1.3k

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BiSeq DMR

updated 4.0 years ago by James W. MacDonald 66k • written 4.0 years ago by akhaira • 0

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614

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BiSeq Coldata

4.1 years ago akhaira • 0

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671

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biseq R methylation

4.1 years ago AishaD • 0

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641

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biseq betaRegression RRBS Methylation

4.3 years ago i.s.castanho • 0

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772

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BiSeq Wald test Beta regression

5.4 years ago mira • 0

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1.0k

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biseq package installation r

updated 5.5 years ago by Martin Morgan 25k • written 5.5 years ago by lwh863 • 0

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950

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biseq ccle

5.9 years ago spr ▴ 10

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1.1k

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dna methylation biseq

updated 6.5 years ago by Gordon Smyth 51k • written 6.5 years ago by ahmad.moousavi • 0

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1.2k

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biseq RRBS betaregression

7.3 years ago l.eijssen • 0

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1.3k

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biseq methylation dmr analysis

updated 7.5 years ago by Katja Hebestreit ▴ 130 • written 7.5 years ago by jjalmagro • 0

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1.9k

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biseq error trimClusters

updated 8.4 years ago by Katja Hebestreit ▴ 130 • written 8.5 years ago by kms68 • 0

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1.7k

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methylation linear model dmr bsseq biseq

8.6 years ago enricoferrero ▴ 660

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1.9k

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BiSeq readBismark

updated 8.7 years ago by James W. MacDonald 66k • written 8.7 years ago by Neel Aluru ▴ 460

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2.6k

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dmr methylation deseq2 bsseq biseq

updated 8.7 years ago by Kasper Daniel Hansen ★ 6.5k • written 8.7 years ago by enricoferrero ▴ 660

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3.2k

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biseq fdr data results

9.2 years ago • updated 9.1 years ago mnaymik ▴ 10

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2.1k

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biseq RRBS SAAP-BS coverage

9.2 years ago maria.maqueda • 0

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1.8k

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BiSeq BiSeq

updated 10.4 years ago by David Iles ▴ 130 • written 10.4 years ago by Hans-Ulrich Klein ▴ 330

23 results • Page 1 of 1

Recent ...

Replies

Comment: Ranking the GSEA Results by Lluís Revilla Sancho ▴ 730

You can have the ranking without the cutoff. If you don't keep any gene set after the cutoff then there is nothing to rank as you said, so…

Answer: Create a Graph w/ Only the Genes Interaction by Antonio • 0

Thank you all, I solved my issue by creating a for loop. Cheers!

Comment: Ranking the GSEA Results by alserg ▴ 270

Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself

Comment: Ranking the GSEA Results by alserg ▴ 270

Where did you see ranking of genes by `log2FC * (-log10 p-value)`? I don't think I ever saw one and not sure what it should achieve. Aren't…

Comment: Trouble Installing DADA2 (warning: R new user) by shepherl 3.9k

As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…

Votes

Comment: Ranking the GSEA Results

Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)

ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features

Comment: How to get the DMR?

Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it

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Popular Question to mohammedtoufiq91 ▴ 10