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Bioc2021
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Bioconductor 2021 Scholarship and Caregiver Awards
Bioc2021
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3.4 years ago
shepherl
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Nominations for Bioconductor 2021 Awards!
Bioconductor
Bioc2021
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3.5 years ago
shepherl
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Long-term Bioconductor Contribution Award
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Bioc2021
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3.5 years ago
shepherl
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Bioconductor
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Bioconductor Award for Outstanding Documentation
Bioc2021
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3.5 years ago
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Bioconductor
3.6 years ago
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bioc2021
Bioconductor
3.6 years ago
shepherl
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Bioc2021
3.6 years ago
shepherl
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Bioc2021 Registration is Open
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Bioc2021
3.6 years ago
shepherl
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Submission Deadline for Bioc2021 Next Week!
Conference
Bioc2021
updated 3.7 years ago by
Levi Waldron
★ 1.1k • written 3.7 years ago by
shepherl
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BioC2021 organizing committee
BioC2021
S4Vectors
4.0 years ago
Levi Waldron
★ 1.1k
11 results • Page
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Answer: Epic v2 Annotation CpG_maf source?
by
James W. MacDonald
67k
Those all come from dbSNP by way of UCSC. [See here][1], particularly lines 114 and onward. Here is no MAF for a CpG. The MAF is for the…
Comment: Deseq2 res Function
by
James W. MacDonald
67k
In addition to Mike's comment, do note that if you are generating a heatmap based on the set of significant genes, the direction of your co…
Answer: Struggle with the replicates of epic array data
by
James W. MacDonald
67k
You shouldn't be using beta values for a linear model that assumes a unimodal, untruncated distribution (beta values are strictly on (0-1) …
Comment: Identifying potentially associated gene set to drug response using GSVA
by
Robert Castelo
★ 3.4k
So, if I understand correctly, you derived GSVA scores from gene sets corresponding somehow to drugs in your RNA-seq data. Since GSVA score…
Answer: Deseq2 res Function
by
Michael Love
43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
Votes
Appropriate use of the function treat of the limma package
Comment: Is it recommended to analyze different tissues together when using edgeR
Answer: Deseq2 res Function
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
Answer: ANOVA like approach of edgeR
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