Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
BioConductor
•
reset
1
vote
3
replies
301
views
Allele frequencies for ALL alleles of one SNP ?
Bioconductor
8 days ago • updated 1 day ago
Abiologist
• 0
10
votes
7
replies
1.8k
views
Why in Bioconductor community people rarely upvote questions?
bioconductor
updated 10 days ago by
shepherl
4.1k • written 21 months ago by
L
▴ 50
1
vote
0
replies
226
views
News:
Bioconductor 3.20 is Released!
Bioconductor
Release
Software
22 days ago
shepherl
4.1k
0
votes
0
replies
111
views
News:
Announcing the GBCC2025 Logo Design Contest!
Conference
Community
Galaxy
GBCC2025
Bioconductor
27 days ago
Maria Doyle
▴ 90
1
vote
3
replies
537
views
Tutorial regarding metabolomics with R
Bioconductor
Metabolomics
xcms
updated 29 days ago by
James W. MacDonald
67k • written 4 weeks ago by
abhisek001
• 0
0
votes
0
replies
105
views
News:
List of Deprecated Packages for Bioc3.20
Devel
Bioconductor
Release
4 weeks ago • updated 28 days ago
shepherl
4.1k
1
vote
2
replies
487
views
DESeq2 design and contrasts with 2 drug-treated and one control group
DESeq2
Bioconductor
updated 7 weeks ago by
Michael Love
42k • written 9 weeks ago by
JT
▴ 10
0
votes
0
replies
167
views
News:
Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries
Community
Teaching
Bioconductor
8 weeks ago
Maria Doyle
▴ 90
1
vote
8
replies
412
views
Can't post a question?
Bioconductor
written 8 weeks ago by
blmurphy
• 0
2
votes
2
replies
347
views
How to read OSCA book?
BIOCON
OSCA
Bioconductor
9 weeks ago
zr
• 0
1
vote
2
replies
346
views
WARNING: No Bioconductor dependencies detected.
Bioconductor
Biocon
10 weeks ago
katja.danielzik
• 0
0
votes
2
replies
383
views
concentration tables suitable as input for new packages?
Bioconductor
10 weeks ago
katja.danielzik
• 0
2
votes
0
replies
363
views
News:
Save the Date for EuroBioC2025 in Barcelona!
EuroBioC2025
Conference
Bioconductor
Community
10 weeks ago
Maria Doyle
▴ 90
0
votes
5
replies
612
views
ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
Bioconductor
clusterProfiler
updated 8 weeks ago by
Lluís Revilla Sancho
▴ 760 • written 10 weeks ago by
semra
• 0
0
votes
0
replies
407
views
News:
Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
Conference
Bioconductor
Community
11 weeks ago
Maria Doyle
▴ 90
0
votes
1
reply
448
views
Unable to install/use limma
limma
Bioconductor
updated 11 weeks ago by
James W. MacDonald
67k • written 11 weeks ago by
Jennifer
• 0
1
vote
2
replies
355
views
Review process for delivering R packages
Bioconductor
12 weeks ago
XFWu
• 0
0
votes
1
reply
345
views
News:
BioCAsia 2024 Registration Now Open!
BioCAsia2024
Conference
Community
Bioconductor
12 weeks ago
Maria Doyle
▴ 90
1
vote
3
replies
724
views
Non-zero exit status error when installing GenomeInfoDbData
DECIPHER
GenomeInfoDbData
Bioconductor
GenomeInfoDb
written 3 months ago by
dbjohnson7
• 0
0
votes
0
replies
322
views
Job:
PhD position: Analysis of epistatic interactions in enzymes using long-read sequencing data
NGS
AI
Bioconductor
updated 12 weeks ago by
Tyler Sagendorf
▴ 10 • written 3 months ago by
Gerhard Thallinger
▴ 180
0
votes
0
replies
235
views
BioCAsia 2024 Abstract Deadline - August 26th
BioCAsia2024
Community
Conference
Bioconductor
3 months ago
Maria Doyle
▴ 90
0
votes
0
replies
265
views
News:
EuroBioC Updates: Important Deadlines
Conference
EuroBioC2024
Bioconductor
Community
EuroBioC
3 months ago
Maria Doyle
▴ 90
2
votes
4
replies
447
views
Bioconductor Submission question
Bioconductor
3 months ago
XFWu
• 0
0
votes
0
replies
221
views
News:
Annual Nominations Open for CAB and TAB! Deadline Aug 31
TAB
CAB
Bioconductor
3 months ago
shepherl
4.1k
0
votes
0
replies
238
views
EuroBioC2024 Flashtalks & Birds-of-a-Feather Sessions - submissions open!
Community
Conference
Bioconductor
EuroBioC2024
3 months ago
Maria Doyle
▴ 90
0
votes
4
replies
675
views
featureCounts error: Assertion `numOfBuckets > 0' failed
featureCounts
Subread
Bioconductor
4 months ago • updated 3 months ago
Jessica
• 0
1
vote
0
replies
486
views
News:
Bioconductor Package Download Rate Limitation (HTTP 429)
downloads
http429
http
Bioconductor
3 months ago
shepherl
4.1k
0
votes
2
replies
421
views
Installing Bioconductor
Bioconductor
updated 4 months ago by
Lluís Revilla Sancho
▴ 760 • written 4 months ago by
mariyahgeorge14
• 0
0
votes
0
replies
270
views
News:
EuroBioC2024 Carpentries workshops Sep 2-3
Community
Workshop
Bioconductor
EuroBioC2024
4 months ago
Maria Doyle
▴ 90
0
votes
0
replies
264
views
News:
BioC2024 in-person registration closes soon (July 10)
BioC2024
Conference
Bioconductor
Community
4 months ago
Maria Doyle
▴ 90
0
votes
0
replies
316
views
Difference in Predictive component of PLS and OPLS Model
Metabolomics
plotGrouper
Bioconductor
ropls
PLSDAbatch
4 months ago
devarti.mahakalkar
• 0
0
votes
3
replies
446
views
How to search Pubmed Central or other fulltext literature base using regex?
metaMSdata
Bioconductor
4 months ago
Abiologist
• 0
2
votes
2
replies
5.0k
views
Unable to install the package "tissuesGeneExpression"
bioconductor
updated 4 months ago by
Muhammad Abdullah
• 0 • written 7.4 years ago by
mdroog
▴ 10
0
votes
1
reply
337
views
BiomaRt listAttributes - which are external ?
Bioconductor
getBM
updated 4 months ago by
James W. MacDonald
67k • written 4 months ago by
Abiologist
• 0
4
votes
2
replies
680
views
Behaviour of featureCounts when quantifying multi-mapping reads
Bioconductor
featurecounts
subread
5 months ago
Rachael
• 0
1
vote
5
replies
1.2k
views
Issues with installing Bioconductor packages (eg GEOquery)
GEOquery
Bioconductor
updated 5 months ago by
ATpoint
★ 4.5k • written 5 months ago by
Isabel
• 0
0
votes
1
reply
295
views
How to access the Bioconductor in Windows
Bioconductor
updated 5 months ago by
ATpoint
★ 4.5k • written 5 months ago by
fahad.rashid
• 0
0
votes
0
replies
253
views
EuroBioC2024 Registration is Open!
Community
Conference
Bioconductor
EuroBioC2024
5 months ago
Maria Doyle
▴ 90
0
votes
3
replies
1.1k
views
ChAMP not available for bioconductor 3.19
Bioconductor
ChAMP
updated 5 months ago by
shepherl
4.1k • written 5 months ago by
Macsue
• 0
0
votes
0
replies
250
views
News:
Legacy Bioconductor Installation
Installation
Bioconductor
6 months ago
shepherl
4.1k
0
votes
0
replies
296
views
News:
Online course: Network Analysis in Systems Biology with R/Bioconductor
SystemsBiology
Bioconductor
Network
6 months ago
info
▴ 10
0
votes
0
replies
261
views
News:
Bioconductor Build System
Builds
Bioconductor
6 months ago
shepherl
4.1k
0
votes
0
replies
338
views
News:
BioC2024 Bioconductor Carpentries RNA-Seq Workshop July 22-23
BioC2024
Conference
Bioconductor
Community
6 months ago
Maria Doyle
▴ 90
0
votes
1
reply
376
views
Problem in execuation of filterAndTrim command in DADA2
Bioconductor
dada2
6 months ago • updated 4 months ago
abhisek001
• 0
0
votes
6
replies
954
views
Running ENmix with mouse methylation manifest: readidat error - Error in readmanifest(manifestfile) : length(control.line) == 1 && is.integer(cont…
ENmix
Bioconductor
updated 5 months ago by
kred
• 0 • written 6 months ago by
minardsmitha
▴ 10
3
votes
5
replies
863
views
Error while installing BiocManager::install("org.Vdahliae.eg.db")
org.vdahlaie.eg.db
Bioconductor
6 months ago
Patadù
▴ 20
1
vote
0
replies
605
views
News:
Last Call: Nominations for Bioconductor Awards 2024! Deadline May 15
Recognition
Awards
Bioconductor
Bioc204
8 months ago • updated 6 months ago
shepherl
4.1k
0
votes
1
reply
282
views
Recovering my account credentials on Bioconductor
Bioconductor
updated 6 months ago by
shepherl
4.1k • written 6 months ago by
cyril.dalmasso
• 0
4
votes
0
replies
781
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
6 months ago
shepherl
4.1k
0
votes
0
replies
314
views
News:
BioC2024 deadlines approaching
BioC2024
Bioconductor
Community
6 months ago
Maria Doyle
▴ 90
50 results • Page
1 of 1
Recent ...
Replies
Answer: DE analysis on Single cell RNA Seq time course data (using pseudotime) with 5 di
by
James W. MacDonald
67k
The two contrasts at the bottom are identical but for the sign of the logFC, so you should expect the same results (except for flipped sign…
Comment: Identical samples after deseq2 batch effect removal
by
Michael Love
42k
Oh, i didn't realize there is another method in the mix here. I would not necessarily trust this "batch correction" method, and suspect o…
Comment: Identifying potentially associated gene set to drug response using GSVA
by
Kent
• 0
Hi @robertc thanks for the reply. I should have explained to you the context first. I am testing over a hundred drugs on patient samples (s…
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
by
James W. MacDonald
67k
You can easily answer this question yourself. ``` > library(BiocPkgTools) Loading required package: htmlwidgets > depdf <- buildPkgDe…
Answer: HilBertVis install error
by
James W. MacDonald
67k
It appears you have compiler flags set that preclude you from compiling (-Werror=format-security). If I install `HilbertVis` on my work box…
Votes
A: TopGO: How to retrieve the gene list related to a GO ID ?
A: Error in DESeqDataSet : some values in assay are not integers
A: correcting the batch effects in Limma and SVA
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
Awards
• All
Popular Question
to
Talip
▴ 10
Popular Question
to
alexandre.blais
▴ 50
Popular Question
to
Fred Hutch (Recruiting)
▴ 40
Scholar
to
Gordon Smyth
51k
Popular Question
to
chase.mateusiak
• 0
Locations
• All
Germany,
53 minutes ago
Australia,
1 hour ago
United States,
1 hour ago
Denmark,
2 hours ago
WEHI, Melbourne, Australia,
2 hours ago
Traffic: 621 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6