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Hi everyone, Does anyone know where to download the human Annotating Genomes with GFF3 or GTF files or the function featureCount download it automatically in the command line. I did the unpaired end alignment using hg38 reference genome. My objective is to quantify read counts in the bam file using featureCounts.
featureCounts -t exon -g gene_id -a annotation.gtf -o counts.txt mapping_results_SE.bam
Best, ad