Teacher
Created An Answer With At Least 3 Up-Votes
Awarded 2258 times (see all awards). Earned by the
following contributors:
4 years, 8 months ago
EMBL Heidelberg
A: Getting rs ids using chr coordinates | Biomart
4 years, 9 months ago
United States
A: Installing DESeq2 fails ; R can't find basic commands like 'rm' and 'mv'
4 years, 9 months ago
United States
A: Odd DESeq2 results - high significance in genes with too many zeros
4 years, 10 months ago
Germany
C: Rsamtools is not available for (for R version 4.0.2)
4 years, 10 months ago
United States
A: Using spike-in RNA for normalization of Salmon counts imported using Tximport
4 years, 10 months ago
United States
A: How does BiocParallel export variables to threads?
4 years, 10 months ago
United States
A: Correctly set contrast with DESeq2 for not full rank design matrix
4 years, 10 months ago
United States
A: Limma multi-group analysis - General F-test
4 years, 10 months ago
Italy
A: readMSData and netCDF files, how to set polarity ?
4 years, 10 months ago
WEHI, Melbourne, Australia
A: edgeR Time course analysis, choice on degree of freedom
4 years, 10 months ago
WEHI, Melbourne, Australia
A: Suggestion for next revision of edgeR User Guide re Design matrix setup
4 years, 10 months ago
The city by the bay
A: Suggestion for next revision of edgeR User Guide re Design matrix setup
4 years, 11 months ago
WEHI, Melbourne, Australia
A: linear mixed models using edgeR+limma
4 years, 11 months ago
United States
A: The Mac version of R always reports an error when installing WGCNA
4 years, 11 months ago
WEHI, Melbourne, Australia
A: Multi-level experiments in Limma
4 years, 12 months ago
Republic of Ireland
A: Converting numeric variables to factors in DESeq metadata
4 years, 12 months ago
United States
A: Cannot extract size factor from DESeq2 analysis
5 years ago
The city by the bay
A: featAssayPlotDefaults does not work for SummarizedExperiment object
5 years ago
United States
A: RNA seq analysis using Deseq2 and apeglm lfc shrinkage
5 years, 1 month ago
Seattle, WA, United States
A: how to close the recognizes features of type miRNA in "makeTxDbFromGFF"
5 years, 1 month ago
WEHI, Melbourne, Australia
A: How to know if I should use voomWithQualityWeights() or not?
5 years, 1 month ago
WEHI, Melbourne, Australia
A: Correcting for tissue purity in differential expression analysis
5 years, 2 months ago
Republic of Ireland
A: [WGCNA]How to visualize network of genes in one module
5 years, 2 months ago
United States
A: Filtering low variance genes for WGCNA
5 years, 3 months ago
WEHI, Melbourne, Australia
A: How to deal with elimination of genes when using filterByExpr function?
5 years, 3 months ago
Australia/Melbourne/Monash University G…
A: How to translate FASTA file of DNA sequence to protein sequence using Biostrings
5 years, 4 months ago
WEHI, Melbourne, Australia
A: Can I use (length bias normalization) from packages like EDAseq or cqn for input
5 years, 5 months ago
United States
A: WGCNA gene significance and module membership
5 years, 5 months ago
Sheffield, Uk
A: How to convert dataframe into ExpressionSetIllumina / summarized data with beada
5 years, 5 months ago
United States
A: Filtering lowly-expressed genes in a RNASeq dataset with continuous instead of g
5 years, 5 months ago
WEHI, Melbourne, Australia
A: Account for inter individual variability at the baseline using nested models
5 years, 6 months ago
The city by the bay
A: could not find function "plotQC" in scater package
5 years, 6 months ago
The city by the bay
A: Further clarification on when not to use duplicateCorrelation with technical rep
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6