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following contributors:
10 years ago
WEHI, Melbourne, Australia
A: EdgeR User Guide. Analysis with multiple factors. Section 3.3.1
10 years ago
The city by the bay
Obtaining Differentially expressed gene lists at a Fold change and FDR cut-off
10 years ago
Icahn School of Medicine at Mount Sinai…
A: Are joint tests of model coefficients in the limma package possible?
10 years ago
UPF, Barcelona, Spain
basic R question: concatenate two numeric vectors grouped by element index
10 years ago
United States
Use R/Bioconductor to match BLAST hits to GO terms?
10 years ago
UPF, Barcelona, Spain
A: basic R question: concatenate two numeric vectors grouped by element index
10 years ago
WEHI, Melbourne, Australia
A: Remove batch effect in small RNASeq study (SVA or others?)
10 years ago
The city by the bay
A: extract similar expressed genes (SEGs) rather than DEGs
10 years ago
EMBL European Molecular Biology Laborat…
A: package specifically dedicated to a manuscript
10 years ago
United States
Installation of TxDb.Hsapiens.UCSC.hg19.knownGene fails.
10 years ago
The city by the bay
Obtaining Differentially expressed gene lists at a Fold change and FDR cut-off
10 years ago
United States
Use R/Bioconductor to match BLAST hits to GO terms?
10 years ago
United States
A: Limma ebayes returns a list with Affy pd.hugene.2.0.st arrays
10 years, 1 month ago
United Kingdom
A: [ReportingTools] HTMLReport of DESeq2 results using Ensembl Gene Ids
10 years, 1 month ago
Zentrum für Molekularbiologie, Universi…
DEXSeq Usage and Expression Confusion
10 years, 1 month ago
WEHI, Melbourne, Australia
A: proper transformation for differential expression in normalized log expression d
10 years, 1 month ago
United States
Use R/Bioconductor to match BLAST hits to GO terms?
10 years, 1 month ago
United States
A: HTMLReport of DESeq2 results with Ensembl Gene Ids
10 years, 1 month ago
United States
A: How to get genes within a GO category of 'GOstat' results?
10 years, 1 month ago
United States
Use R/Bioconductor to match BLAST hits to GO terms?
10 years, 1 month ago
WEHI, Melbourne, Australia
Confidence intervals on edgeR logFC
10 years, 1 month ago
WEHI, Melbourne, Australia
A: p-values from robust linear model in LIMMA
10 years, 1 month ago
WEHI, Melbourne, Australia
A: GenomicAlignments is too slow with summarizeOverlaps
10 years, 1 month ago
United States
Use R/Bioconductor to match BLAST hits to GO terms?
10 years, 1 month ago
Seattle, WA, United States
Get sequences for GRCh38 genome based on TxDb object locations
10 years, 1 month ago
Seattle, WA, United States
A: Get sequences for GRCh38 genome based on TxDb object locations
10 years, 1 month ago
Barcelona/Universitat Pompeu Fabra
A: phastCons scores for GRCh38
10 years, 1 month ago
Barcelona/Universitat Pompeu Fabra
Bioconductor package versions
10 years, 2 months ago
Seattle, WA, United States
Algorithm description for matchPWM (Biostrings)
10 years, 2 months ago
WEHI, Melbourne, Australia
A: Only one replicate: inferring dispersion from other group
10 years, 2 months ago
United States
A: error with many packages: "Error : .onLoad failed in loadNamespace() for 'org.Hs
10 years, 2 months ago
Seattle, WA, United States
A: about INCLUSIVE INTERSECTION of GRANGES
10 years, 2 months ago
United States
Is Bioconductor 3.0 compatible with R 3.1.2?
10 years, 2 months ago
United States
Use R/Bioconductor to match BLAST hits to GO terms?
10 years, 2 months ago
United States
A: deseq2 - many differentially expressed genes
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