Scholar
Created An Answer That Has Been Accepted
Awarded 5053 times (see all awards). Earned by the
following contributors:
1 week, 3 days ago
WEHI, Melbourne, Australia
Answer: RSubread output significantly different from bash Subread output
1 week, 3 days ago
The city by the bay
Answer: Running multiple KNN queries in parallel
1 week, 4 days ago
Germany
Answer: RSubread output significantly different from bash Subread output
3 weeks, 1 day ago
United States
Answer: Struggle with the replicates of epic array data
3 weeks, 6 days ago
WEHI, Melbourne, Australia
Answer: Is it recommended to analyze different tissues together when using edgeR
4 weeks ago
United States
Answer: CleanUpRNAseq with a GTF that is missing mitochondria annotation data
4 weeks ago
WEHI, Melbourne, Australia
Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
1 month ago
WEHI, Melbourne, Australia
Answer: Limma- Print-tip loess normalisation-printer layout information does not match M
1 month, 2 weeks ago
Australia
Answer: Supercells with Basilisk fails for dtype('float64') to dtype('int64') conversion
1 month, 2 weeks ago
United States
Answer: biomaRt rnorvegicus_gene_ensembl not available anymore
1 month, 3 weeks ago
United States
Answer: Robust way of dealing with low number of samples for Differential Gene Expressio
1 month, 3 weeks ago
United States
Answer: Samples used for network inference in RegEnrich
1 month, 3 weeks ago
WEHI, Melbourne, Australia
Answer: Analysis of 2*4 factorial design
1 month, 3 weeks ago
United States
Answer: clusterProfiler enrichGO on only T-cell related GO terms
1 month, 3 weeks ago
WEHI, Melbourne, Australia
Answer: LIMMA Differing P-Values for Treatment-Contrast Parameterization vs Group-Means
1 month, 4 weeks ago
WEHI, Melbourne, Australia
Answer: Zero intra-block correlation in RRBS analysis using voomLmFit with block
2 months ago
United States
Answer: DESeq2 - interactions when using factors concatenated into group
2 months ago
United States
Answer: How to reverse complement some elements of a DNAStringSet
2 months ago
WEHI, Melbourne, Australia
Answer: How to subset voomLmFit (MArrayLM) object?
2 months, 1 week ago
United States
Answer: Are transformed values from rlog /vst log2 normalized counts?
2 months, 1 week ago
United States
Answer: How to conduct maSigPro analysis with only one condition?
2 months, 1 week ago
WEHI, Melbourne, Australia
Answer: edgeR 4.2.1 compression bug: a minimally reproducible snippet
2 months, 1 week ago
Japan
Answer: Highly DE genes but small count difference within conditions
2 months, 1 week ago
United States
Answer: Highly DE genes but small count difference within conditions
2 months, 2 weeks ago
Germany
Answer: How to control batch effect if Group and batch are same?
2 months, 3 weeks ago
United States
Answer: ISO a solution to rank-order introns by transcript
2 months, 3 weeks ago
United States
Answer: Issues with retrieving Zea mays genes dataset: biomaRt error: looks like we're c
2 months, 3 weeks ago
United States
Answer: Batch adjustment for cohort based RNA seq data
3 months, 1 week ago
United States
Answer: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic
3 months, 1 week ago
United States
Answer: Should tSNE from biol. replicates look alike?
3 months, 2 weeks ago
United States
Answer: Size factor normalized counts for between sample comparisons - correct?
3 months, 3 weeks ago
WEHI, Melbourne, Australia
Answer: voom does not seem to properly correct for library size
4 months ago
United States
Answer: What is the importance of `--countReadPairs` in featureCounts on paired end data
4 months ago
WEHI, Melbourne, Australia
Answer: using limma trend workflow in CAMERA
4 months, 1 week ago
Germany
Answer: DESeq2 is it OK to scale transformed data in order to plot heatmaps?
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6