Scholar
Created An Answer That Has Been Accepted
Awarded 5073 times (see all awards). Earned by the
following contributors:
6 months ago
Japan
Answer: Highly DE genes but small count difference within conditions
6 months ago
United States
Answer: Highly DE genes but small count difference within conditions
6 months, 1 week ago
Germany
Answer: How to control batch effect if Group and batch are same?
6 months, 2 weeks ago
United States
Answer: ISO a solution to rank-order introns by transcript
6 months, 2 weeks ago
United States
Answer: Issues with retrieving Zea mays genes dataset: biomaRt error: looks like we're c
6 months, 2 weeks ago
United States
Answer: Batch adjustment for cohort based RNA seq data
7 months, 1 week ago
United States
Answer: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic
7 months, 1 week ago
United States
Answer: Should tSNE from biol. replicates look alike?
7 months, 2 weeks ago
United States
Answer: Size factor normalized counts for between sample comparisons - correct?
7 months, 2 weeks ago
WEHI, Melbourne, Australia
Answer: voom does not seem to properly correct for library size
7 months, 3 weeks ago
United States
Answer: What is the importance of `--countReadPairs` in featureCounts on paired end data
7 months, 4 weeks ago
WEHI, Melbourne, Australia
Answer: using limma trend workflow in CAMERA
8 months ago
Germany
Answer: DESeq2 is it OK to scale transformed data in order to plot heatmaps?
8 months ago
WEHI, Melbourne, Australia
Answer: RUV - Does my data need further normalisation?
8 months ago
Germany
Answer: Why is the inclusion of RUVs not reflected in the EDA plots produced from normal
8 months ago
United States
Answer: How to Query Only SNPs from the biomaRt Variation Database
8 months, 1 week ago
United States
Answer: DESeq2: How to Compare the Condition Effects of Two Different Treatments?
8 months, 1 week ago
United States
Answer: How to use specific size factors and average transcript lengths from tximport i
8 months, 1 week ago
Ireland
Answer: Deseq2 design formula and analysis with internal controls
8 months, 2 weeks ago
United States
Answer: A question occur when using DESeq2 on a complex design
8 months, 3 weeks ago
United States
Answer: Doubt about model in paired samples (intercept ?)
8 months, 3 weeks ago
United States
Answer: DeSeq2 Model Problems with species, tissue, and tissue status nesting
8 months, 3 weeks ago
United States
Answer: Parallel comparison of two DNAString objects with IUPAC ambiguities
8 months, 3 weeks ago
United States
Answer: DESeq fitNbinomGLMs Warning Issue: In fitNbinomGLMs(objectNZ[fitidx, , drop = FA
8 months, 3 weeks ago
United States
Answer: Limma comparing gene expression between base line and one treatment
8 months, 4 weeks ago
United States
Answer: Limma - 0 downreg and upreg values
9 months ago
WEHI, Melbourne, Australia
Answer: LIMMA 2x2 Factorial Design with Paired Samples
9 months ago
United States
Answer: findOverlaps(), queryHits and subjectHits()
9 months, 1 week ago
Germany
Answer: Inconsistent nullp and goseq enrichment results across operating systems
9 months, 1 week ago
United States
Answer: Mapping Between GenBank ID's and Uniprot
9 months, 3 weeks ago
WEHI, Melbourne, Australia
Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it
9 months, 3 weeks ago
WEHI, Melbourne, Australia
Answer: Warning message when running limma with covariates
9 months, 3 weeks ago
United States
Answer: Test of Multiple Linear Combination on coefficients from Wald Test in Deseq2
9 months, 4 weeks ago
United States
Answer: Create multiple DoparParams with different number of registered cores
10 months ago
United States
Answer: DESeq2 returns results for group with just one replicate
10 months ago
Australia
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
10 months ago
Australia
Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
10 months, 1 week ago
Barcelona/Universitat Pompeu Fabra
Answer: Interpretation of GSVA with absRanking=TRUE
10 months, 2 weeks ago
United States
Answer: LRT, pairwise comparisons and p-value adjustment
10 months, 3 weeks ago
Germany
Answer: Get gene symbols for a set of hg19 coordinates
10 months, 3 weeks ago
United States
Answer: Slightly different count plots from R and spreadsheet
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6